Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 25942
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000360439; ENSP00000353622; ENSG00000169375.
Genome annotation databasesEnsembl ENST00000394947; ENSP00000378402; ENSG00000169375.
Genome annotation databasesEnsembl ENST00000394949; ENSP00000378403; ENSG00000169375.
Genome annotation databasesGeneID 25942; -.
Genome annotation databasesKEGG hsa:25942; -.
Genome annotation databasesUCSC uc002bai.3; human.
Sequence databasesCCDS CCDS10279.1; -.
Sequence databasesEMBL AF418569; AAP97288.1; -; mRNA.
Sequence databasesEMBL BC018973; AAH18973.1; -; mRNA.
Sequence databasesEMBL BC137098; AAI37099.1; -; mRNA.
Sequence databasesEMBL BC137099; AAI37100.1; -; mRNA.
Sequence databasesEMBL AK027559; BAB55197.1; -; mRNA.
Sequence databasesEMBL AK074903; BAC11280.1; -; mRNA.
Sequence databasesEMBL AK096477; BAC04801.1; -; mRNA.
Sequence databasesEMBL AY044430; AAK95854.1; -; mRNA.
Sequence databasesEMBL AL117513; CAB55972.1; -; mRNA.
Sequence databasesPIR T17282; T17282.
Sequence databasesRefSeq NP_001138829.1; NM_001145357.1.
Sequence databasesRefSeq NP_001138830.1; NM_001145358.1.
Sequence databasesRefSeq NP_056292.1; NM_015477.2.
Sequence databasesRefSeq XP_006720528.1; XM_006720465.1.
Sequence databasesRefSeq XP_006720529.1; XM_006720466.1.
Sequence databasesRefSeq XP_006720530.1; XM_006720467.1.
Sequence databasesUniGene Hs.513039; -.
Polymorphism databasesDMDM 37999759; -.
Gene expression databasesBgee Q96ST3; -.
Gene expression databasesCleanEx HS_SIN3A; -.
Gene expression databasesExpressionAtlas Q96ST3; baseline and differential.
Gene expression databasesGenevestigator Q96ST3; -.
OntologiesGO GO:0005737; C:cytoplasm; IDA:HPA.
OntologiesGO GO:0045171; C:intercellular bridge; IDA:HPA.
OntologiesGO GO:0000776; C:kinetochore; IEA:Ensembl.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; ISS:UniProtKB.
OntologiesGO GO:0016580; C:Sin3 complex; IDA:UniProtKB.
OntologiesGO GO:0005667; C:transcription factor complex; IEA:Ensembl.
OntologiesGO GO:0017053; C:transcriptional repressor complex; IEA:Ensembl.
OntologiesGO GO:0003682; F:chromatin binding; IEA:Ensembl.
OntologiesGO GO:0033558; F:protein deacetylase activity; IMP:BHF-UCL.
OntologiesGO GO:0001102; F:RNA polymerase II activating transcription factor binding; IPI:BHF-UCL.
OntologiesGO GO:0001106; F:RNA polymerase II transcription corepressor activity; IEA:Ensembl.
OntologiesGO GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:Ensembl.
OntologiesGO GO:0000976; F:transcription regulatory region sequence-specific DNA binding; ISS:UniProtKB.
OntologiesGO GO:0002218; P:activation of innate immune response; IMP:BHF-UCL.
OntologiesGO GO:0007568; P:aging; IEA:Ensembl.
OntologiesGO GO:0007596; P:blood coagulation; TAS:Reactome.
OntologiesGO GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.
OntologiesGO GO:0034613; P:cellular protein localization; IEA:Ensembl.
OntologiesGO GO:0071333; P:cellular response to glucose stimulus; IEA:Ensembl.
OntologiesGO GO:0006260; P:DNA replication; IEA:Ensembl.
OntologiesGO GO:0002244; P:hematopoietic progenitor cell differentiation; IEA:Ensembl.
OntologiesGO GO:0001701; P:in utero embryonic development; IEA:Ensembl.
OntologiesGO GO:0043066; P:negative regulation of apoptotic process; IEA:Ensembl.
OntologiesGO GO:0042754; P:negative regulation of circadian rhythm; ISS:UniProtKB.
OntologiesGO GO:1901675; P:negative regulation of histone H3-K27 acetylation; IMP:BHF-UCL.
OntologiesGO GO:1900181; P:negative regulation of protein localization to nucleus; IMP:BHF-UCL.
OntologiesGO GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.
OntologiesGO GO:2000678; P:negative regulation of transcription regulatory region DNA binding; IMP:BHF-UCL.
OntologiesGO GO:0045892; P:negative regulation of transcription, DNA-templated; ISS:UniProtKB.
OntologiesGO GO:0031937; P:positive regulation of chromatin silencing; IMP:BHF-UCL.
OntologiesGO GO:0002230; P:positive regulation of defense response to virus by host; IMP:BHF-UCL.
OntologiesGO GO:0010971; P:positive regulation of G2/M transition of mitotic cell cycle; IEA:Ensembl.
OntologiesGO GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.
OntologiesGO GO:0006476; P:protein deacetylation; IMP:BHF-UCL.
OntologiesGO GO:0043619; P:regulation of transcription from RNA polymerase II promoter in response to oxidative stress; IEA:Ensembl.
OntologiesGO GO:0051595; P:response to methylglyoxal; IEA:Ensembl.
OntologiesGO GO:0010243; P:response to organonitrogen compound; IEA:Ensembl.
OntologiesGO GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB Q96ST3; -.
Proteomic databasesPaxDb Q96ST3; -.
Proteomic databasesPeptideAtlas Q96ST3; -.
Proteomic databasesPRIDE Q96ST3; -.
Family and domain databasesGene3D 1.20.1160.11; -; 3.
Family and domain databasesInterPro IPR013194; HDAC_interact.
Family and domain databasesInterPro IPR003822; PAH.
Family and domain databasesPfam PF02671; PAH; 3.
Family and domain databasesPfam PF08295; Sin3_corepress; 1.
Family and domain databasesPROSITE PS51477; PAH; 3.
Family and domain databasesSMART SM00761; HDAC_interact; 1.
Family and domain databasesSUPFAM SSF47762; SSF47762; 3.
PTM databasesPhosphoSite Q96ST3; -.
Protein-protein interaction databasesBioGrid 117439; 186.
Protein-protein interaction databasesDIP DIP-31515N; -.
Protein-protein interaction databasesIntAct Q96ST3; 42.
Protein-protein interaction databasesMINT MINT-2815493; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000353622; -.
Enzyme and pathway databasesReactome REACT_19241; Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha).
Enzyme and pathway databasesReactome REACT_200856; NoRC negatively regulates rRNA expression.
Enzyme and pathway databasesReactome REACT_24970; Factors involved in megakaryocyte development and platelet production.
3D structure databasesPDB 1PO4; Model; -; B=295-383.
3D structure databasesPDBsum 1PO4; -.
3D structure databasesProteinModelPortal Q96ST3; -.
3D structure databasesSMR Q96ST3; 119-189, 295-385, 453-527.
Phylogenomic databaseseggNOG COG5602; -.
Phylogenomic databasesGeneTree ENSGT00390000007239; -.
Phylogenomic databasesHOVERGEN HBG060425; -.
Phylogenomic databasesInParanoid Q96ST3; -.
Phylogenomic databasesKO K11644; -.
Phylogenomic databasesOMA NDHGGTA; -.
Phylogenomic databasesOrthoDB EOG7SV0TV; -.
Phylogenomic databasesPhylomeDB Q96ST3; -.
Phylogenomic databasesTreeFam TF106187; -.
Organism-specific databasesCTD 25942; -.
Organism-specific databasesGeneCards GC15M075661; -.
Organism-specific databasesH-InvDB HIX0012443; -.
Organism-specific databasesH-InvDB HIX0019634; -.
Organism-specific databasesH-InvDB HIX0172841; -.
Organism-specific databasesHGNC HGNC:19353; SIN3A.
Organism-specific databasesHPA CAB004506; -.
Organism-specific databasesHPA HPA047213; -.
Organism-specific databasesMIM 607776; gene.
Organism-specific databasesneXtProt NX_Q96ST3; -.
Organism-specific databasesPharmGKB PA134993567; -.
OtherChiTaRS SIN3A; human.
OtherGeneWiki SIN3A; -.
OtherGenomeRNAi 25942; -.
OtherNextBio 47516; -.
OtherPRO PR:Q96ST3; -.



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