Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6606
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000351205; ENSP00000305857; ENSG00000172062. [Q16637-1]
Genome annotation databasesEnsembl ENST00000380707; ENSP00000370083; ENSG00000172062. [Q16637-1]
Genome annotation databasesEnsembl ENST00000380741; ENSP00000370117; ENSG00000205571. [Q16637-1]
Genome annotation databasesEnsembl ENST00000380742; ENSP00000370118; ENSG00000205571. [Q16637-2]
Genome annotation databasesEnsembl ENST00000380743; ENSP00000370119; ENSG00000205571. [Q16637-1]
Genome annotation databasesEnsembl ENST00000503079; ENSP00000428128; ENSG00000172062. [Q16637-2]
Genome annotation databasesEnsembl ENST00000506163; ENSP00000424926; ENSG00000172062. [Q16637-3]
Genome annotation databasesEnsembl ENST00000611442; ENSP00000483768; ENSG00000277773. [Q16637-2]
Genome annotation databasesEnsembl ENST00000614240; ENSP00000479279; ENSG00000205571. [Q16637-2]
Genome annotation databasesEnsembl ENST00000614610; ENSP00000479920; ENSG00000273772. [Q16637-1]
Genome annotation databasesEnsembl ENST00000614773; ENSP00000481427; ENSG00000273772. [Q16637-2]
Genome annotation databasesEnsembl ENST00000618251; ENSP00000483515; ENSG00000277773. [Q16637-1]
Genome annotation databasesEnsembl ENST00000618661; ENSP00000483819; ENSG00000277773. [Q16637-1]
Genome annotation databasesEnsembl ENST00000622158; ENSP00000480906; ENSG00000275349. [Q16637-2]
Genome annotation databasesEnsembl ENST00000622739; ENSP00000482966; ENSG00000275349. [Q16637-1]
Genome annotation databasesEnsembl ENST00000624634; ENSP00000485595; ENSG00000277773. [Q16637-2]
Genome annotation databasesGeneID 6606; -.
Genome annotation databasesGeneID 6607; -.
Genome annotation databasesKEGG hsa:6606; -.
Genome annotation databasesKEGG hsa:6607; -.
Genome annotation databasesUCSC uc003jyd.3; human. [Q16637-1]
Genome annotation databasesUCSC uc003jye.3; human. [Q16637-2]
Genome annotation databasesUCSC uc003jyf.3; human. [Q16637-3]
Genome annotation databasesUCSC uc003jyg.3; human. [Q16637-4]
Sequence databasesCCDS CCDS34181.1; -. [Q16637-1]
Sequence databasesCCDS CCDS34182.1; -. [Q16637-2]
Sequence databasesCCDS CCDS4007.1; -. [Q16637-1]
Sequence databasesCCDS CCDS4008.1; -. [Q16637-2]
Sequence databasesCCDS CCDS75256.1; -. [Q16637-3]
Sequence databasesEMBL U43883; AAC50473.1; -; Genomic_DNA.
Sequence databasesEMBL U43876; AAC50473.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43877; AAC50473.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43878; AAC50473.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43880; AAC50473.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43881; AAC50473.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43882; AAC50473.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U18423; AAA66242.1; -; mRNA.
Sequence databasesEMBL U80017; AAC52048.1; -; Genomic_DNA.
Sequence databasesEMBL AK289669; BAF82358.1; -; mRNA.
Sequence databasesEMBL AC004999; AAC83178.1; -; Genomic_DNA.
Sequence databasesEMBL AC005031; AAC62262.1; -; Genomic_DNA.
Sequence databasesEMBL U21914; AAA64505.1; -; mRNA.
Sequence databasesEMBL BC000908; AAH00908.1; -; mRNA.
Sequence databasesEMBL BC015308; AAH15308.1; -; mRNA.
Sequence databasesEMBL BC062723; AAH62723.1; -; mRNA.
Sequence databasesEMBL BC070242; AAH70242.1; -; mRNA.
Sequence databasesPIR A55477; A55477.
Sequence databasesRefSeq NP_000335.1; NM_000344.3. [Q16637-1]
Sequence databasesRefSeq NP_001284644.1; NM_001297715.1. [Q16637-3]
Sequence databasesRefSeq NP_059107.1; NM_017411.3. [Q16637-1]
Sequence databasesRefSeq NP_075012.1; NM_022874.2. [Q16637-2]
Sequence databasesRefSeq NP_075013.1; NM_022875.2. [Q16637-3]
Sequence databasesRefSeq NP_075014.1; NM_022876.2. [Q16637-2]
Sequence databasesRefSeq NP_075015.1; NM_022877.2. [Q16637-4]
Sequence databasesUniGene Hs.202179; -.
Sequence databasesUniGene Hs.535788; -.
Polymorphism databasesDMDM 2498924; -.
Gene expression databasesBgee Q16637; -.
Gene expression databasesCleanEx HS_SMN1; -.
Gene expression databasesCleanEx HS_SMN2; -.
Gene expression databasesExpressionAtlas Q16637; baseline.
Gene expression databasesGenevestigator Q16637; -.
OntologiesGO GO:0015030; C:Cajal body; IDA:UniProtKB.
OntologiesGO GO:0005737; C:cytoplasm; IDA:UniProtKB.
OntologiesGO GO:0005829; C:cytosol; IDA:UniProtKB.
OntologiesGO GO:0097504; C:Gemini of coiled bodies; IDA:UniProtKB.
OntologiesGO GO:0005654; C:nucleoplasm; IDA:UniProtKB.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0032797; C:SMN complex; IDA:UniProtKB.
OntologiesGO GO:0034719; C:SMN-Sm protein complex; IDA:UniProtKB.
OntologiesGO GO:0042802; F:identical protein binding; IPI:IntAct.
OntologiesGO GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
OntologiesGO GO:0008219; P:cell death; IEA:UniProtKB-KW.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0034660; P:ncRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
OntologiesGO GO:0042307; P:positive regulation of protein import into nucleus; IDA:UniProtKB.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000245; P:spliceosomal complex assembly; IMP:UniProtKB.
OntologiesGO GO:0000387; P:spliceosomal snRNP assembly; IDA:UniProtKB.
Proteomic databasesMaxQB Q16637; -.
Proteomic databasesPaxDb Q16637; -.
Proteomic databasesPRIDE Q16637; -.
Family and domain databasesInterPro IPR010304; Survival_motor_neuron.
Family and domain databasesInterPro IPR002999; Tudor.
Family and domain databasesPfam PF06003; SMN; 1.
Family and domain databasesPROSITE PS50304; TUDOR; 1.
Family and domain databasesSMART SM00333; TUDOR; 1.
PTM databasesPhosphoSite Q16637; -.
Protein-protein interaction databasesBioGrid 112490; 186.
Protein-protein interaction databasesBioGrid 112491; 18.
Protein-protein interaction databasesDIP DIP-31309N; -.
Protein-protein interaction databasesIntAct Q16637; 144.
Protein-protein interaction databasesMINT MINT-95544; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000370083; -.
Enzyme and pathway databasesReactome REACT_11066; snRNP Assembly.
3D structure databasesPDB 1G5V; NMR; -; A=82-169.
3D structure databasesPDB 1MHN; X-ray; 1.80 A; A=89-147.
3D structure databasesPDB 2LEH; NMR; -; B=26-51.
3D structure databasesPDB 3S6N; X-ray; 2.50 A; M=26-62.
3D structure databasesPDB 4A4E; NMR; -; A=84-147.
3D structure databasesPDB 4A4G; NMR; -; A=84-147.
3D structure databasesPDB 4GLI; X-ray; 1.90 A; A=263-294.
3D structure databasesPDB 4QQ6; X-ray; 1.75 A; A=82-147.
3D structure databasesPDBsum 1G5V; -.
3D structure databasesPDBsum 1MHN; -.
3D structure databasesPDBsum 2LEH; -.
3D structure databasesPDBsum 3S6N; -.
3D structure databasesPDBsum 4A4E; -.
3D structure databasesPDBsum 4A4G; -.
3D structure databasesPDBsum 4GLI; -.
3D structure databasesPDBsum 4QQ6; -.
3D structure databasesProteinModelPortal Q16637; -.
3D structure databasesSMR Q16637; 26-51, 90-147, 252-281.
Protocols and materials databasesDNASU 6606; -.
Protocols and materials databasesDNASU 6607; -.
Phylogenomic databaseseggNOG NOG296671; -.
Phylogenomic databasesGeneTree ENSGT00730000111041; -.
Phylogenomic databasesHOGENOM HOG000232199; -.
Phylogenomic databasesHOVERGEN HBG000211; -.
Phylogenomic databasesInParanoid Q16637; -.
Phylogenomic databasesKO K13129; -.
Phylogenomic databasesOMA TTPLKQW; -.
Phylogenomic databasesOrthoDB EOG7K6PVX; -.
Phylogenomic databasesPhylomeDB Q16637; -.
Phylogenomic databasesTreeFam TF318390; -.
Organism-specific databasesCTD 6606; -.
Organism-specific databasesCTD 6607; -.
Organism-specific databasesGeneCards GC05P069345; -.
Organism-specific databasesGeneCards GC05P070220; -.
Organism-specific databasesGeneReviews SMN1; -.
Organism-specific databasesGeneReviews SMN2; -.
Organism-specific databasesHGNC HGNC:11117; SMN1.
Organism-specific databasesHGNC HGNC:11118; SMN2.
Organism-specific databasesHPA CAB009344; -.
Organism-specific databasesHPA CAB016324; -.
Organism-specific databasesMIM 253300; phenotype.
Organism-specific databasesMIM 253400; phenotype.
Organism-specific databasesMIM 253550; phenotype.
Organism-specific databasesMIM 271150; phenotype.
Organism-specific databasesMIM 600354; gene.
Organism-specific databasesMIM 601627; gene.
Organism-specific databasesneXtProt NX_Q16637; -.
Organism-specific databasesOrphanet 83330; Proximal spinal muscular atrophy type 1.
Organism-specific databasesOrphanet 83418; Proximal spinal muscular atrophy type 2.
Organism-specific databasesOrphanet 83419; Proximal spinal muscular atrophy type 3.
Organism-specific databasesOrphanet 83420; Proximal spinal muscular atrophy type 4.
Organism-specific databasesPharmGKB PA35967; -.
ChemistryChEMBL CHEMBL1293232; -.
OtherEvolutionaryTrace Q16637; -.
OtherGeneWiki SMN1; -.
OtherGeneWiki SMN2; -.
OtherNextBio 25707; -.
OtherPRO PR:Q16637; -.



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