Cancer Cell Metabolism Database ~~ Bioinformatics and Systems Medicine Laboratory ~~

Cancer Cell Metabolism Gene Database

Cancer Cell Metabolism Gene DB

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Gene-Gene Network

* Using all Interacting genes, we can get KEGG pathway information from DAVID.

Interacting Genes (from Pathway Commons)

Target Genes	DBs	Relations
BIND	interacts-with	SMAD2,THRA,THRB,VDR,
BIND	neighbor-of	SMAD2,THRA,THRB,VDR,
DatabaseofInteractingProteins	interacts-with	VDR,
DatabaseofInteractingProteins	neighbor-of	VDR,
NCIPathwayInteractionDatabase	controls-expression-of	ABCA1,ITGA6,KLK3,NRIP1, SREBF1,TNF,
	controls-phosphorylation-of	RPS6KB1,
	controls-state-change-of	RPS6KB1,
	neighbor-of	RXRB,RXRG,SREBF1,TNF, VDR,
	in-complex-with	VDR,
PANTHERPathway	in-complex-with	VDR,
PANTHERPathway	neighbor-of	VDR,
BioGRID	interacts-with	SMAD2,SMARCA4,SMN2,SNW1, SP1,SRC,STAT1,SUMO1, TADA3,TAF1B,TBP,TDG, THRA,THRB,TK1,TMPRSS3, TRIM24,TRIM32,UBC,UBQLN4, VDR,
BioGRID	neighbor-of	SMAD2,SMARCA4,SMN2,SNW1, SP1,SRC,STAT1,SUMO1, TADA3,TAF1B,TBP,TDG, THRA,THRB,TK1,TMPRSS3, TRIM24,TRIM32,UBC,UBQLN4, VDR,
HPRD	interacts-with	SMAD2,SMARCD1,SMARCD3,SNW1, SP1,SRC,SRF,TADA3, TAF11,TBP,TDG,THRA, THRB,TMPRSS3,TRIM24,TRIP10, TRIP4,UBQLN4,VDR,ZBTB16, ZNHIT3,
HPRD	neighbor-of	SMAD2,SMARCD1,SMARCD3,SNW1, SP1,SRC,SRF,TADA3, TAF11,TBP,TDG,THRA, THRB,TMPRSS3,TRIM24,TRIP10, TRIP4,UBQLN4,VDR,ZBTB16, ZNHIT3,
IntAct	interacts-with	SMAD2,SMN2,STAT1,TK1, TMPRSS3,UBQLN4,VDR,ZBTB16, ZNF423,
IntAct	neighbor-of	SMAD2,SMN2,STAT1,TK1, TMPRSS3,UBQLN4,VDR,ZBTB16, ZNF423,
Reactome	controls-expression-of	ABCA1,ABCB4,ACADM,ACOX1, ACSL1,ADIPOQ,AGT,ANGPTL4, ANKRD1,APOA1,APOA2,APOA5, CD36,CEBPA,CPT1A,CPT2, CTGF,CYP1A1,CYP4A11,CYP7A1, FABP1,FABP4,FADS1,FHL2, G0S2,GLIPR1,GRHL1,HMGCS2, LEP,LPL,ME1,NPAS2, PCK1,PEX11A,PLIN1,PLIN2, PPARA,RGL1,SLC27A1,SLC2A4, SULT2A1,TIAM2,TNFRSF21,TRIB3, TXNRD1,UGT1A9,
	controls-state-change-of	ACTN2,AKAP9,CAMK2A,CAMK2B, CAMK2D,CAMK2G,DLAT,DLD, DLG4,FABP6,GRIN1,GRIN2A, GRIN2B,GRIN2C,GRIN2D,NEFL, PDHA1,PDHB,PDHX,
	catalysis-precedes	ASIC1,ASIC2,ASIC3,ASIC4, ASIC5,ATP1A1,ATP1A2,ATP1A3, ATP1A4,ATP1B1,ATP1B2,ATP1B3, FXYD1,FXYD2,FXYD3,FXYD4, FXYD6,FXYD7,HSD3B7,NALCN, SCNN1A,SCNN1B,SCNN1D,SCNN1G, SLC17A3,SLC25A20,SLC4A4,SLC4A5, SLC4A7,SLC4A9,SLC9A6,SLC9A7, SLC9A8,SLC9A9,TRPM4,TRPM5, UNC79,UNC80,
	neighbor-of	RXRB,RXRG,SIN3A,SIN3B, SLC10A2,SLC10A6,SLC27A1,SLC2A4, SMARCD3,SP1,SREBF1,SREBF2, SULT2A1,TBL1XR1,TBL1X,TEAD1, TEAD2,TEAD3,TEAD4,TGFB1, TGS1,THRA,THRB,TIAM2, TNFRSF21,TNF,TRIB3,TXNRD1, UGT1A9,VDR,WNT10B,WNT1, WWTR1,YAP1,
	in-complex-with	SIN3A,SIN3B,SMARCD3,TBL1XR1, TBL1X,TGS1,
	controls-transport-of-chemical	chenodeoxycholic acid,cholic acid,glycochenodeoxycholic acid,glycocholic acid, sodium(1+),taurocholic acid,