mutLBSgeneDB |
Gene summary for TASP1 |
Gene summary |
Basic gene Info. | Gene symbol | TASP1 |
Gene name | taspase, threonine aspartase, 1 | |
Synonyms | C20orf13|dJ585I14.2 | |
Cytomap | UCSC genome browser: 20p12.1 | |
Type of gene | protein-coding | |
RefGenes | NM_017714.2, | |
Description | taspase 1taspase-1threonine aspartase 1 | |
Modification date | 20141207 | |
dbXrefs | MIM : 608270 | |
HGNC : HGNC | ||
Ensembl : ENSG00000089123 | ||
HPRD : 07460 | ||
Vega : OTTHUMG00000031904 | ||
Protein | UniProt: Q9H6P5 go to UniProt's Cross Reference DB Table | |
Expression | CleanEX: HS_TASP1 | |
BioGPS: 55617 | ||
Pathway | NCI Pathway Interaction Database: TASP1 | |
KEGG: TASP1 | ||
REACTOME: TASP1 | ||
Pathway Commons: TASP1 | ||
Context | iHOP: TASP1 | |
ligand binding site mutation search in PubMed: TASP1 | ||
UCL Cancer Institute: TASP1 | ||
Assigned class in mutLBSgeneDB | B: This gene belongs to targetable_mutLBSgenes. |
Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez |
GO ID | GO Term | PubMed ID |
Top |
Ligand binding site mutations for TASP1 |
Lollipop-style diagram of mutations at LBS in amino-acid sequence. We represented ligand binding site mutations only. (You can see big image via clicking.) : non-synonymous mutation on LBS, Circle size denotes number of samples. |
Cancer type specific mutLBS sorted by frequency |
LBS | AAchange of nsSNV | Cancer type | # samples | G292 | G294A | BLCA | 1 |
cf) Cancer type abbreviation. BLCA: Bladder urothelial carcinoma, BRCA: Breast invasive carcinoma, CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma, COAD: Colon adenocarcinoma, GBM: Glioblastoma multiforme, LGG: Brain lower grade glioma, HNSC: Head and neck squamous cell carcinoma, KICH: Kidney chromophobe, KIRC: Kidney renal clear cell carcinoma, KIRP: Kidney renal papillary cell carcinoma, LAML: Acute myeloid leukemia, LUAD: Lung adenocarcinoma, LUSC: Lung squamous cell carcinoma, OV: Ovarian serous cystadenocarcinoma, PAAD: Pancreatic adenocarcinoma, PRAD: Prostate adenocarcinoma, SKCM: Skin cutaneous melanoma, STAD: Stomach adenocarcinoma, THCA: Thyroid carcinoma, UCEC: Uterine corpus endometrial carcinoma. |
Top |
Protein structure related information for TASP1 |
Relative protein structure stability change (ΔΔE) using Mupro 1.1 Mupro score denotes assessment of the effect of mutations on thermodynamic stability. (ΔΔE<0: mutation decreases stability, ΔΔE>0: mutation increases stability) |
: nsSNV at non-LBS: nsSNV at LBS |
nsSNVs sorted by the relative stability change of protein structure by each mutation Blue: mutations of positive stability change. and red : the most recurrent mutation for this gene. |
LBS | AAchange of nsSNV | Relative stability change | G292 | G294A | 0.18328617 |
(MuPro1.1: Jianlin Cheng et al., Prediction of Protein Stability Changes for Single-Site Mutations Using Support Vector Machines, PROTEINS: Structure, Function, and Bioinformatics. 2006, 62:1125-1132) |
Structure image for TASP1 from PDB |
Top |
Differential gene expression and gene-gene network for TASP1 |
Differential gene expression between mutated and non-mutated LBS samples in all 16 major cancer types |
Differential co-expressed gene network based on protein-protein interaction data (CePIN) |
Top |
Top |
Phenotype information for TASP1 |
Gene level disease information (DisGeNet) |
Disease ID | Disease name | # PubMed | Association type |
Mutation level pathogenic information (ClinVar annotation) |
Allele ID | AA change | Clinical significance | Origin | Phenotype IDs |
Top |
Pharmacological information for TASP1 |
Gene expression profile of anticancer drug treated cell-lines (CCLE) Heatmap showing the correlation between gene expression and drug response across all the cell-lines. We chose the top 20 among 138 drugs.We used Pearson's correlation coefficient. |
Drug information targeting mutLBSgene (Approved drugs only) |
Drug status | DrugBank ID | Name | Type | Drug structure |
Gene-centered ligand-gene interaction network |
Ligands binding to mutated ligand binding site of TASP1 go to BioLip |
Ligand ID | Ligand short name | Ligand long name | PDB ID | PDB name | mutLBS | CL | CHLORIDE | 2a8m | B | G292 |
Top |
Conservation information for LBS of TASP1 |
Multiple alignments for Q9H6P5 in multiple species |
LBS | AA sequence | # species | Species | A48 | FVLVHAGAGYH | 2 | Homo sapiens, Mus musculus | A48 | LVILHAGAGLY | 1 | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | A48 | FVAVHVGAGYH | 1 | Arabidopsis thaliana | G292 | AVSTSGCGEHL | 2 | Homo sapiens, Mus musculus | G292 | AVATSGTGEHI | 1 | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | G292 | GCCVSGAGEYL | 1 | Arabidopsis thaliana | G49 | VLVHAGAGYHS | 2 | Homo sapiens, Mus musculus | G49 | VILHAGAGLYS | 1 | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | G49 | VAVHVGAGYHA | 1 | Arabidopsis thaliana | N100 | DSPFTNAGMGS | 1 | Homo sapiens | N100 | DSPVTNAGVGS | 1 | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | N100 | DDPSTNAGRGS | 1 | Arabidopsis thaliana | N100 | DSPFTNAGIGS | 1 | Mus musculus | S252 | AAAVSSGGLAL | 2 | Homo sapiens, Mus musculus | S252 | AVVSSSGGLLL | 1 | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | S252 | ACGSSSGGIAM | 1 | Arabidopsis thaliana | T234 | SGTLDTVGAVV | 2 | Homo sapiens, Mus musculus | T234 | ----DTIGVIC | 1 | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | T234 | DKIMDTVGVIC | 1 | Arabidopsis thaliana | T99 | EDSPFTNAGMG | 1 | Homo sapiens | T99 | EDSPVTNAGVG | 1 | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | T99 | EDDPSTNAGRG | 1 | Arabidopsis thaliana | T99 | EDSPFTNAGIG | 1 | Mus musculus |
Copyright © 2016-Present - The University of Texas Health Science Center at Houston |