gene,0,0 GSM1643170,0,9.88 GSM1643171,0,10.24 GSM1643147,0,5.806 GSM1643148,0,7.551 GSM1643172,0,6.175 GSM1643173,0,6.398 GSM1643174,0,6.642 GSM1643175,0,5.05 GSM1643176,0,8.645 GSM1643149,0,4.324 GSM1643150,0,6.053 GSM1643177,0,5.253 GSM1643178,0,5.861 GSM1643179,0,4.555 GSM1643151,0,2.308 GSM1643152,0,10.424 GSM1643157,0,5.504 GSM1643158,0,4.387 GSM1643163,0,5.734 GSM1643164,0,7.428 GSM1643153,0,7.393 GSM1643154,0,3.122 GSM1643143,0,38.24 GSM1643144,0,36.836 GSM1643155,0,29.949 GSM1643156,0,20.716 GSM1643159,0,41.014 GSM1643160,0,27.502 GSM1643165,0,31.324 GSM1643166,0,31.898 GSM1643167,0,35.656 GSM1643168,0,30.899 GSM1643169,0,34.749 GSM1643145,0,31.489 GSM1643146,0,29.454 GSM1643161,0,29.239 GSM1643162,0,22.069
| Synonyms | NIMP;OPA10 |
| Description | reticulon 4 interacting protein 1 |
|---|---|
| Chromosome | 6q21 |
| Database Reference | MIM:610502 HGNC:18647 HPRD:18008 Vega:OTTHUMG00000015304 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67259 |
| RTN4IP1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| d2 AG+ cells | 9.88 | 10.06 | 10.24 |
| d2 BTAG+ cells | 5.806 | 6.398 | 7.551 |
| d4 AG+ cells | 5.05 | 6.847 | 8.645 |
| d4 BTAG+ cells | 4.324 | 5.253 | 6.053 |
| d6 BTAG+ cells | 2.308 | 4.945 | 10.424 |
| d6 CSM+ cells | 5.734 | 6.581 | 7.428 |
| d8 BTAG+ cells | 3.122 | 5.257 | 7.393 |
| hiPSC | 20.716 | 31.898 | 41.014 |
| iMeLC | 22.069 | 29.347 | 31.489 |
| Comparing RTN4IP1 expression between groups | FDR |
|---|---|
| d4 AG+ cells VS iMeLC | 0.0308198367935787 |
| d4 BTAG+ cells VS d6 BTAG+ cells | NS |
| d4 BTAG+ cells VS d6 CSM+ cells | NS |
| d4 BTAG+ cells VS d8 BTAG+ cells | NS |
| d4 BTAG+ cells VS hiPSC | 1.14573104539252e-06 |
| d4 BTAG+ cells VS iMeLC | 0.000439671663106924 |
| d6 BTAG+ cells VS d6 CSM+ cells | NS |
| d6 BTAG+ cells VS d8 BTAG+ cells | NS |
| d6 BTAG+ cells VS hiPSC | 3.26957882782322e-05 |
| d6 BTAG+ cells VS iMeLC | 0.00939693060763376 |
| d6 CSM+ cells VS d8 BTAG+ cells | NS |
| d6 CSM+ cells VS hiPSC | 9.14715386273129e-05 |
| d6 CSM+ cells VS iMeLC | 0.0189371417670002 |
| d8 BTAG+ cells VS hiPSC | 0.000884137991186041 |
| d8 BTAG+ cells VS iMeLC | 0.0406235055118515 |
| hiPSC VS iMeLC | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others d2 AG+ cells[2]
d2 BTAG+ cells[5]
d4 AG+ cells[2]
d4 BTAG+ cells[5]
d6 BTAG+ cells[4]
d6 CSM+ cells[2]
d8 BTAG+ cells[2]
hiPSC[11]
iMeLC[4]
