gene,0,0 GSM1657885,0,26 GSM1657932,0,849 GSM1657938,0,78 GSM1657965,0,170 GSM1657969,0,78 GSM1657975,0,76 GSM1657979,0,275 GSM1657981,0,256 GSM1657992,0,7 GSM1657998,0,249 GSM1658000,0,3 GSM1658006,0,3 GSM1658007,0,210 GSM1658010,0,370 GSM1658016,0,502 GSM1658017,0,486 GSM1658020,0,826 GSM1658021,0,133 GSM1658026,0,17 GSM1658027,0,249 GSM1658029,0,140 GSM1658031,0,440 GSM1658043,0,157 GSM1658045,0,992 GSM1658048,0,413 GSM1658049,0,441 GSM1658050,0,27 GSM1658051,0,183 GSM1658053,0,4 GSM1658054,0,112 GSM1658055,0,38 GSM1658056,0,106 GSM1658059,0,314 GSM1658060,0,187 GSM1658061,0,597 GSM1658062,0,38 GSM1658064,0,113 GSM1658065,0,31 GSM1658066,0,56 GSM1658067,0,252 GSM1658068,0,4 GSM1658069,0,26 GSM1658071,0,18 GSM1658072,0,445 GSM1658073,0,1007 GSM1658078,0,401 GSM1658079,0,582 GSM1658081,0,0 GSM1658082,0,1740 GSM1658142,0,65 GSM1658168,0,497 GSM1658174,0,198 GSM1658184,0,13 GSM1658185,0,17 GSM1658186,0,1101 GSM1658187,0,4 GSM1658190,0,251 GSM1658191,0,0 GSM1658193,0,12 GSM1658199,0,0 GSM1658201,0,25 GSM1658202,0,54 GSM1657972,0,0 GSM1657993,0,0 GSM1657995,0,3 GSM1658004,0,0 GSM1658083,0,1 GSM1658085,0,0 GSM1658086,0,2 GSM1658089,0,0 GSM1658092,0,1 GSM1658094,0,18 GSM1658096,0,1 GSM1658098,0,1 GSM1658099,0,103 GSM1658100,0,32 GSM1658102,0,0 GSM1658109,0,0 GSM1658112,0,17 GSM1658003,0,0 GSM1658221,0,2 GSM1658223,0,0 GSM1658225,0,328 GSM1658226,0,3 GSM1658227,0,0 GSM1658229,0,332 GSM1658230,0,107 GSM1658231,0,0 GSM1658232,0,2 GSM1658233,0,161 GSM1658234,0,16 GSM1658235,0,0 GSM1658236,0,0 GSM1658237,0,119 GSM1658238,0,17 GSM1658239,0,4 GSM1658240,0,309 GSM1658241,0,25 GSM1658243,0,202 GSM1658244,0,34 GSM1658245,0,3 GSM1658246,0,0 GSM1658247,0,416 GSM1658248,0,91 GSM1658249,0,10 GSM1658251,0,6 GSM1658253,0,66 GSM1658255,0,450 GSM1658257,0,193 GSM1658259,0,33 GSM1658262,0,53 GSM1658264,0,17 GSM1658266,0,411 GSM1658268,0,6 GSM1658270,0,467 GSM1658272,0,23 GSM1658275,0,0 GSM1658277,0,0 GSM1658279,0,135 GSM1658281,0,69 GSM1658284,0,4 GSM1658286,0,415 GSM1658288,0,420 GSM1658290,0,9 GSM1658292,0,203 GSM1658294,0,383 GSM1658297,0,4 GSM1658299,0,3 GSM1658301,0,267 GSM1658305,0,0 GSM1658306,0,0 GSM1658307,0,0 GSM1658308,0,19 GSM1658309,0,1 GSM1658310,0,32 GSM1658311,0,1 GSM1658312,0,13 GSM1658313,0,4 GSM1658314,0,70 GSM1658315,0,3 GSM1658316,0,0 GSM1658317,0,432 GSM1658318,0,285 GSM1658319,0,0 GSM1658320,0,6 GSM1658321,0,0 GSM1658322,0,0 GSM1658323,0,84 GSM1658324,0,364 GSM1658325,0,33 GSM1658326,0,1 GSM1658327,0,153 GSM1658328,0,18 GSM1658329,0,0 GSM1658330,0,46 GSM1658331,0,43 GSM1658332,0,1020 GSM1658333,0,1 GSM1658334,0,10 GSM1658335,0,0 GSM1658336,0,242 GSM1658337,0,12 GSM1658338,0,0 GSM1658339,0,66 GSM1658340,0,35 GSM1658341,0,0 GSM1658342,0,752 GSM1658343,0,36 GSM1658344,0,2 GSM1658345,0,0 GSM1658346,0,9 GSM1658348,0,0 GSM1658349,0,0 GSM1658350,0,1 GSM1658351,0,0 GSM1658352,0,41 GSM1658353,0,869 GSM1658354,0,10 GSM1658356,0,0 GSM1658357,0,0 GSM1658358,0,324 GSM1658359,0,0 GSM1658360,0,7 GSM1658361,0,237 GSM1658362,0,128 GSM1658363,0,0 GSM1658364,0,0 GSM1658365,0,0 GSM1658366,0,118 GSM1658203,0,522 GSM1658204,0,437 GSM1658205,0,1 GSM1658206,0,11 GSM1658207,0,59 GSM1658208,0,0 GSM1658209,0,631 GSM1658210,0,0 GSM1658211,0,1 GSM1658212,0,1 GSM1658213,0,12 GSM1658214,0,5 GSM1658215,0,152 GSM1658216,0,0 GSM1658217,0,287 GSM1658218,0,96 GSM1658219,0,250 GSM1658220,0,7 GSM1658222,0,0 GSM1658224,0,283 GSM1658228,0,567 GSM1658242,0,0 GSM1658304,0,0 GSM1658347,0,56 GSM1658355,0,100 GSM1657872,0,15 GSM1657874,0,120 GSM1657875,0,3 GSM1657878,0,193 GSM1657879,0,37 GSM1657880,0,23 GSM1657882,0,16 GSM1657883,0,505 GSM1657884,0,89 GSM1657886,0,266 GSM1657887,0,55 GSM1657888,0,29 GSM1657895,0,33 GSM1657896,0,15 GSM1657897,0,0 GSM1657929,0,146 GSM1657936,0,91 GSM1657947,0,278 GSM1658008,0,251 GSM1658011,0,83 GSM1658013,0,37 GSM1658015,0,384 GSM1658019,0,779 GSM1658022,0,137 GSM1658023,0,86 GSM1658024,0,273 GSM1658028,0,759 GSM1658030,0,13 GSM1658036,0,93 GSM1658044,0,18 GSM1658047,0,895 GSM1658057,0,433 GSM1658070,0,42 GSM1658074,0,19 GSM1658075,0,96 GSM1658076,0,624 GSM1658077,0,356 GSM1658132,0,65 GSM1658144,0,2 GSM1658154,0,4 GSM1658161,0,316 GSM1658165,0,12 GSM1658178,0,96 GSM1658183,0,12 GSM1657934,0,2 GSM1657994,0,12 GSM1657996,0,0 GSM1657997,0,0 GSM1657999,0,0 GSM1658188,0,0 GSM1658189,0,0 GSM1658196,0,0 GSM1657930,0,100 GSM1657931,0,0 GSM1657933,0,38 GSM1657935,0,812 GSM1657937,0,353 GSM1657939,0,137 GSM1657940,0,7 GSM1657941,0,309 GSM1657942,0,24 GSM1657943,0,185 GSM1657945,0,59 GSM1657946,0,88 GSM1657948,0,9 GSM1657949,0,47 GSM1657950,0,142 GSM1657951,0,7 GSM1657952,0,429 GSM1657953,0,0 GSM1657954,0,54 GSM1657955,0,626 GSM1657956,0,353 GSM1657957,0,44 GSM1657958,0,311 GSM1657959,0,48 GSM1657960,0,112 GSM1657961,0,22 GSM1657962,0,167 GSM1657963,0,144 GSM1657964,0,40 GSM1657966,0,15 GSM1657967,0,219 GSM1657968,0,256 GSM1657970,0,532 GSM1657971,0,155 GSM1657973,0,479 GSM1657974,0,620 GSM1657976,0,10 GSM1657977,0,474 GSM1657978,0,16 GSM1657980,0,13 GSM1657982,0,59 GSM1657983,0,261 GSM1657984,0,672 GSM1657985,0,62 GSM1657986,0,0 GSM1657987,0,33 GSM1657988,0,525 GSM1657989,0,40 GSM1657990,0,170 GSM1657991,0,3 GSM1658001,0,36 GSM1658002,0,96 GSM1658005,0,40 GSM1658009,0,83 GSM1658012,0,125 GSM1658014,0,302 GSM1658025,0,307 GSM1658032,0,334 GSM1658033,0,123 GSM1658034,0,735 GSM1658035,0,1063 GSM1658037,0,1464 GSM1658038,0,115 GSM1658039,0,14 GSM1658040,0,200 GSM1658041,0,24 GSM1658042,0,551 GSM1658046,0,15 GSM1658052,0,133 GSM1658058,0,215 GSM1658063,0,149 GSM1658080,0,2 GSM1658084,0,116 GSM1658087,0,267 GSM1658090,0,313 GSM1658091,0,52 GSM1658095,0,31 GSM1658101,0,348 GSM1658103,0,11 GSM1658104,0,2 GSM1658105,0,30 GSM1658106,0,2 GSM1658107,0,11 GSM1658108,0,0 GSM1658110,0,68 GSM1658111,0,55 GSM1658113,0,0 GSM1658114,0,270 GSM1658115,0,2 GSM1658127,0,236 GSM1658128,0,10 GSM1658129,0,1149 GSM1658131,0,162 GSM1658134,0,0 GSM1658135,0,80 GSM1658136,0,237 GSM1658137,0,72 GSM1658138,0,99 GSM1658139,0,5 GSM1658141,0,105 GSM1658143,0,104 GSM1658145,0,10 GSM1658146,0,339 GSM1658147,0,102 GSM1658148,0,46 GSM1658149,0,50 GSM1658150,0,26 GSM1658151,0,6 GSM1658152,0,76 GSM1658153,0,32 GSM1658156,0,208 GSM1658158,0,17 GSM1658160,0,133 GSM1658163,0,74 GSM1658166,0,19 GSM1658169,0,86 GSM1658170,0,158 GSM1658171,0,76 GSM1658172,0,5 GSM1658175,0,10 GSM1658176,0,174 GSM1658177,0,0 GSM1658181,0,0 GSM1658182,0,51 GSM1658192,0,12 GSM1658194,0,27 GSM1658195,0,8 GSM1658197,0,6 GSM1658198,0,16 GSM1658200,0,1 GSM1657871,0,585 GSM1657873,0,292 GSM1657876,0,5 GSM1657877,0,0 GSM1657881,0,0 GSM1657889,0,13 GSM1657890,0,0 GSM1657891,0,0 GSM1657892,0,1 GSM1657894,0,10 GSM1657898,0,1 GSM1657899,0,4 GSM1657900,0,74 GSM1657901,0,1 GSM1657902,0,3 GSM1657944,0,52 GSM1658018,0,9 GSM1658088,0,2 GSM1658093,0,21 GSM1658097,0,165 GSM1658130,0,1 GSM1658133,0,0 GSM1658140,0,137 GSM1658155,0,94 GSM1658157,0,163 GSM1658159,0,364 GSM1658162,0,97 GSM1658164,0,15 GSM1658167,0,124 GSM1658173,0,0 GSM1658179,0,140 GSM1658180,0,154 GSM1657893,0,253 GSM1657903,0,12 GSM1658117,0,15 GSM1658122,0,19 GSM1658126,0,0 GSM1657905,0,13 GSM1657912,0,127 GSM1657910,0,3 GSM1657918,0,0 GSM1657919,0,30 GSM1657923,0,0 GSM1657925,0,19 GSM1657926,0,0 GSM1657927,0,32 GSM1658116,0,0 GSM1658121,0,35 GSM1658118,0,0 GSM1658119,0,71 GSM1658120,0,94 GSM1658123,0,0 GSM1658124,0,86 GSM1658125,0,0 GSM1657904,0,1 GSM1657906,0,115 GSM1657907,0,1 GSM1657908,0,22 GSM1657909,0,0 GSM1657911,0,1 GSM1657913,0,248 GSM1657914,0,61 GSM1657915,0,329 GSM1657916,0,108 GSM1657917,0,2 GSM1657920,0,0 GSM1657921,0,10 GSM1657922,0,134 GSM1657924,0,0 GSM1657928,0,58
| Synonyms | CAGH26;GW1;GW182;TNRC6 |
| Description | trinucleotide repeat containing 6A |
|---|---|
| Chromosome | 16p11.2 |
| Database Reference | MIM:610739 HGNC:11969 HPRD:11640 Vega:OTTHUMG00000096999 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67835 |
| TNRC6A expression in each cell group | Minimum Value (Read count) | Median Value (Read count) | Maximum Value (Read count) |
|---|---|---|---|
| cortex astrocytes | 0 | 136.5 | 1,740 |
| cortex endothelial | 0 | 1 | 103 |
| cortex fetal-quiescent | 0 | 11 | 1,020 |
| cortex fetal-replicating | 0 | 12 | 631 |
| cortex hybrid | 0 | 87.5 | 895 |
| cortex microglia | 0 | 0 | 12 |
| cortex neurons | 0 | 73 | 1,464 |
| cortex oligodendrocytes | 0 | 11.5 | 585 |
| cortex OPC | 12 | 132.5 | 253 |
| hippocampus endothelial | 0 | 15 | 19 |
| hippocampus hybrid | 13 | 70 | 127 |
| hippocampus microglia | 0 | 1.5 | 32 |
| hippocampus neurons | 35 | 35 | 35 |
| hippocampus oligodendrocytes | 0 | 35.5 | 94 |
| hippocampus OPC | 0 | 16 | 329 |
| Comparing TNRC6A expression between groups | FDR |
|---|---|
| cortex OPC VS hippocampus OPC | NS |
| cortex OPC VS hippocampus endothelial | NS |
| cortex OPC VS hippocampus hybrid | NS |
| cortex OPC VS hippocampus microglia | NS |
| cortex OPC VS hippocampus neurons | NS |
| cortex OPC VS hippocampus oligodendrocytes | NS |
| cortex astrocytes VS cortex OPC | NS |
| cortex astrocytes VS cortex endothelial | 2.90726239841975e-08 |
| cortex astrocytes VS cortex fetal-quiescent | 0.00382785389473816 |
| cortex astrocytes VS cortex fetal-replicating | NS |
| cortex astrocytes VS cortex hybrid | NS |
| cortex astrocytes VS cortex microglia | 1.44157418173348e-09 |
| cortex astrocytes VS cortex neurons | NS |
| cortex astrocytes VS cortex oligodendrocytes | 0.00278097322449038 |
| cortex astrocytes VS hippocampus OPC | 0.00668917114002007 |
| cortex astrocytes VS hippocampus endothelial | 0.0125335303718547 |
| cortex astrocytes VS hippocampus hybrid | NS |
| cortex astrocytes VS hippocampus microglia | 2.24697694077919e-06 |
| cortex astrocytes VS hippocampus neurons | NS |
| cortex astrocytes VS hippocampus oligodendrocytes | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others cortex astrocytes[62]
cortex endothelial[17]
cortex fetal-quiescent[110]
cortex fetal-replicating[25]
cortex hybrid[44]
cortex microglia[8]
cortex neurons[130]
cortex oligodendrocytes[32]
cortex OPC[2]
hippocampus endothelial[3]
hippocampus hybrid[2]
hippocampus microglia[8]
hippocampus neurons[1]
hippocampus oligodendrocytes[6]
hippocampus OPC[16]
