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General Information

CIITA[ENSG00000179583]

SynonymsC2TA;CIITAIV;MHC2TA;NLRA
Descriptionclass II, major histocompatibility complex, transactivator
Chromosome16p13
Database ReferenceMIM:600005 HGNC:7067 HPRD:02475 Vega:OTTHUMG00000129753 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE72056

Gene Rank

Gene Expression

 

Displaying 1-8 of 8 results.
CIITA expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
B-cell0125.5351,907.39
CAF0011.9
Endothelial cell0099.17
Macrophage039.069407.325
melanoma00154.738
melanoma tumor00.561,302.433
T-cell001,186.188
unresolved00284.297
Displaying 1-20 of 28 results.
Comparing CIITA expression between groupsFDR
B-cell VS CAF4.85851592741267e-44
B-cell VS Endothelial cell2.90516462060528e-27
B-cell VS Macrophage2.58474345203931e-05
B-cell VS T-cell3.43616892887835e-21
B-cell VS melanoma tumor4.24673348111524e-12
B-cell VS melanoma2.0754385447644e-74
B-cell VS unresolved6.49259922330976e-22
CAF VS Endothelial cellNS
CAF VS Macrophage3.32931036110281e-11
CAF VS T-cellNS
CAF VS melanoma tumor9.87986133337755e-14
CAF VS melanomaNS
CAF VS unresolved0.00873916266724414
Endothelial cell VS Macrophage0.000307728536720121
Endothelial cell VS T-cellNS
Endothelial cell VS melanoma tumor0.000123914490880609
Endothelial cell VS melanomaNS
Endothelial cell VS unresolvedNS
Macrophage VS T-cellNS
Macrophage VS melanoma tumorNS
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for CIITA

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 B-cell[326]
 CAF[39]
 Endothelial cell[40]
 Macrophage[42]
 melanoma[1071]
 melanoma tumor[246]
 T-cell[1302]
 unresolved[96]