gene,0,0 GSM967508,0,579.198 GSM967509,0,961.07 GSM967510,0,0 GSM967511,0,896.872 GSM967512,0,1099.052 GSM967513,0,926.328 GSM967514,0,760.684 GSM967515,0,1293.703 GSM967516,0,16.138 GSM967517,0,0.632 GSM967518,0,53.37 GSM967519,0,0.238 GSM967520,0,4.199 GSM967521,0,16.68 GSM967535,0,0 GSM967536,0,55.197 GSM967537,0,87.531 GSM967538,0,54.647 GSM967539,0,24.51 GSM967540,0,0 GSM967541,0,208.614 GSM967542,0,124.982 GSM967543,0,161.771 GSM967544,0,311.449 GSM967545,0,57.707 GSM967546,0,6.914 GSM967547,0,32.135 GSM967548,0,41.632 GSM967549,0,18.032 GSM967550,0,25.594 GSM967551,0,76.223 GSM967552,0,116.719 GSM967553,0,186.959 GSM967554,0,173.784 GSM967555,0,10.118 GSM967556,0,30.694 GSM967557,0,16.127
| Synonyms | HMG-R;HMGA1A;HMGIY |
| Description | high mobility group AT-hook 1 |
|---|---|
| Chromosome | 6p21 |
| Database Reference | MIM:600701 HGNC:5010 HPRD:02829 Vega:OTTHUMG00000014539 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| HMGA1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 911.6 | 1,293.703 |
| LNCaP cell | 0.238 | 10.168 | 53.37 |
| NG2-sorted cell from blood | 0 | 39.579 | 87.531 |
| PC3 cell | 124.982 | 185.192 | 311.449 |
| Primary melanocyte | 6.914 | 32.31 | 57.707 |
| SKMEL5 cell | 18.032 | 28.865 | 41.632 |
| T24 cell | 76.223 | 145.251 | 186.959 |
| UACC257 cell | 10.118 | 16.127 | 30.694 |
| Comparing HMGA1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.000262144651691992 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.000528070530143286 |
| Embryonic stem cell VS PC3 cell | 0.0165131009599998 |
| Embryonic stem cell VS Primary melanocyte | 0.0212534810322277 |
| Embryonic stem cell VS SKMEL5 cell | 0.000238247046216473 |
| Embryonic stem cell VS T24 cell | 0.00477830389804369 |
| Embryonic stem cell VS UACC257 cell | 0.00121960367818247 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | 0.0230716386253947 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
