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General Information

MALAT1[ENSG00000251562]

SynonymsHCN;LINC00047;NCRNA00047;NEAT2;PRO2853;mascRNA
Descriptionmetastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
Chromosome11q13.1
Database ReferenceMIM:607924 HGNC:29665 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE72056

Gene Rank

Gene Expression

 

Displaying 1-8 of 8 results.
MALAT1 expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
B-cell125.022,653.6326,491.821
CAF74.491761.5575,407.187
Endothelial cell162.9521,812.6193,854.934
Macrophage01,021.7095,391.813
melanoma01,084.6326,586.119
melanoma tumor02,623.3410,919.411
T-cell37.8492,716.96118,193.498
unresolved01,282.459,273.339
Displaying 1-20 of 28 results.
Comparing MALAT1 expression between groupsFDR
B-cell VS CAF4.30699750490517e-16
B-cell VS Endothelial cell4.85809082337184e-07
B-cell VS Macrophage3.82028145674319e-19
B-cell VS T-cellNS
B-cell VS melanoma tumorNS
B-cell VS melanoma3.46993619401773e-34
B-cell VS unresolved3.66048351200409e-10
CAF VS Endothelial cellNS
CAF VS MacrophageNS
CAF VS T-cell5.00925530847885e-20
CAF VS melanoma tumor1.55410750510198e-09
CAF VS melanomaNS
CAF VS unresolvedNS
Endothelial cell VS MacrophageNS
Endothelial cell VS T-cell4.90213451615894e-07
Endothelial cell VS melanoma tumor0.000560777143488151
Endothelial cell VS melanomaNS
Endothelial cell VS unresolvedNS
Macrophage VS T-cell3.67001649094905e-22
Macrophage VS melanoma tumor6.32928331987146e-11
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for MALAT1

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 B-cell[326]
 CAF[39]
 Endothelial cell[40]
 Macrophage[42]
 melanoma[1071]
 melanoma tumor[246]
 T-cell[1302]
 unresolved[96]