gene,0,0 GSM967508,0,861.471 GSM967509,0,1044.151 GSM967510,0,906.843 GSM967511,0,767.107 GSM967512,0,1080.196 GSM967513,0,602.442 GSM967514,0,598.568 GSM967515,0,1175.898 GSM967516,0,566.357 GSM967517,0,540.164 GSM967518,0,605.767 GSM967519,0,314.338 GSM967520,0,664.257 GSM967521,0,286.5 GSM967535,0,339.677 GSM967536,0,333.687 GSM967537,0,614.664 GSM967538,0,542.772 GSM967539,0,397.346 GSM967540,0,310.019 GSM967541,0,811.734 GSM967542,0,792.575 GSM967543,0,702.546 GSM967544,0,526.731 GSM967545,0,161.701 GSM967546,0,343.78 GSM967547,0,887.187 GSM967548,0,1173.646 GSM967549,0,992.53 GSM967550,0,993.699 GSM967551,0,238.956 GSM967552,0,176.56 GSM967553,0,278.009 GSM967554,0,393.398 GSM967555,0,976.721 GSM967556,0,1007.731 GSM967557,0,1358.863
| Synonyms | PAB1;PABP;PABP1;PABPC2;PABPL1 |
| Description | poly(A) binding protein cytoplasmic 1 |
|---|---|
| Chromosome | 8q22.2-q23 |
| Database Reference | MIM:604679 HGNC:8554 HPRD:05247 Vega:OTTHUMG00000164779 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| PABPC1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 598.568 | 884.157 | 1,175.898 |
| LNCaP cell | 286.5 | 553.261 | 664.257 |
| NG2-sorted cell from blood | 310.019 | 368.511 | 614.664 |
| PC3 cell | 526.731 | 747.561 | 811.734 |
| Primary melanocyte | 161.701 | 252.741 | 343.78 |
| SKMEL5 cell | 887.187 | 993.115 | 1,173.646 |
| T24 cell | 176.56 | 258.483 | 393.398 |
| UACC257 cell | 976.721 | 1,007.731 | 1,358.863 |
| Comparing PABPC1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.0256435933457953 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.00879548793774608 |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | 0.0419959114616593 |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | 0.00308373257007089 |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.0447000154651666 |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | 0.0265979912823677 |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
