gene,0,0 GSM967508,0,6.091 GSM967509,0,17.119 GSM967510,0,20.908 GSM967511,0,50.934 GSM967512,0,29.645 GSM967513,0,56.876 GSM967514,0,0.352 GSM967515,0,9.625 GSM967516,0,0.866 GSM967517,0,0.029 GSM967518,0,0.039 GSM967519,0,0.051 GSM967520,0,0 GSM967521,0,0.384 GSM967535,0,0 GSM967536,0,8.918 GSM967537,0,0 GSM967538,0,16.821 GSM967539,0,5.538 GSM967540,0,10.983 GSM967541,0,0.031 GSM967542,0,4.397 GSM967543,0,0.069 GSM967544,0,19.271 GSM967545,0,0.03 GSM967546,0,0 GSM967547,0,2.255 GSM967548,0,0 GSM967549,0,0 GSM967550,0,0 GSM967551,0,24.212 GSM967552,0,0.039 GSM967553,0,0.347 GSM967554,0,0.042 GSM967555,0,1.539 GSM967556,0,0 GSM967557,0,0
| Synonyms | PC42;PCDH42 |
| Description | protocadherin 1 |
|---|---|
| Chromosome | 5q31.3 |
| Database Reference | MIM:603626 HGNC:8655 HPRD:04692 Vega:OTTHUMG00000129661 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| PCDH1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0.352 | 19.014 | 56.876 |
| LNCaP cell | 0 | 0.045 | 0.866 |
| NG2-sorted cell from blood | 0 | 7.228 | 16.821 |
| PC3 cell | 0.031 | 2.233 | 19.271 |
| Primary melanocyte | 0 | 0.015 | 0.03 |
| SKMEL5 cell | 0 | 0 | 2.255 |
| T24 cell | 0.039 | 0.194 | 24.212 |
| UACC257 cell | 0 | 0 | 1.539 |
| Comparing PCDH1 expression between groups | FDR |
|---|---|
| PC3 cell VS T24 cell | NS |
| PC3 cell VS UACC257 cell | NS |
| Primary melanocyte VS SKMEL5 cell | NS |
| Primary melanocyte VS T24 cell | NS |
| Primary melanocyte VS UACC257 cell | NS |
| SKMEL5 cell VS T24 cell | NS |
| SKMEL5 cell VS UACC257 cell | NS |
| T24 cell VS UACC257 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
