gene,0,0 GSM967508,0,15.425 GSM967509,0,1.998 GSM967510,0,24.391 GSM967511,0,9.327 GSM967512,0,15.941 GSM967513,0,20.821 GSM967514,0,44.705 GSM967515,0,6.095 GSM967516,0,0 GSM967517,0,0.017 GSM967518,0,0.023 GSM967519,0,0.014 GSM967520,0,0.017 GSM967521,0,0 GSM967535,0,0.206 GSM967536,0,0.112 GSM967537,0,0 GSM967538,0,0.119 GSM967539,0,0 GSM967540,0,0.156 GSM967541,0,9.537 GSM967542,0,32.554 GSM967543,0,15.117 GSM967544,0,41.236 GSM967545,0,0.099 GSM967546,0,0.458 GSM967547,0,0 GSM967548,0,0 GSM967549,0,6.307 GSM967550,0,0 GSM967551,0,0.427 GSM967552,0,11.26 GSM967553,0,12.673 GSM967554,0,0 GSM967555,0,0 GSM967556,0,0 GSM967557,0,0
| Synonyms | COLL1;HH16;Hsema-I;Hsema-III;SEMA1;SEMAD;SEMAIII;SEMAL;SemD;coll-1 |
| Description | semaphorin 3A |
|---|---|
| Chromosome | 7p12.1 |
| Database Reference | MIM:603961 HGNC:10723 HPRD:04908 Vega:OTTHUMG00000023443 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SEMA3A expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 1.998 | 15.683 | 44.705 |
| LNCaP cell | 0 | 0.016 | 0.023 |
| NG2-sorted cell from blood | 0 | 0.116 | 0.206 |
| PC3 cell | 9.537 | 23.836 | 41.236 |
| Primary melanocyte | 0.099 | 0.279 | 0.458 |
| SKMEL5 cell | 0 | 0 | 6.307 |
| T24 cell | 0 | 5.843 | 12.673 |
| UACC257 cell | 0 | 0 | 0 |
| Comparing SEMA3A expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.0128494589717517 |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | 0.0258722603369207 |
| LNCaP cell VS PC3 cell | 0.000152699323344353 |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.0185052923536349 |
| LNCaP cell VS T24 cell | 0.000852737131655416 |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | 0.00207171661501532 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | 0.00928966937674942 |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
