gene,0,0 GSM967508,0,1230.908 GSM967509,0,1998.124 GSM967510,0,1396.705 GSM967511,0,1943.757 GSM967512,0,1262.925 GSM967513,0,1280.413 GSM967514,0,1197.254 GSM967515,0,2274.34 GSM967516,0,215.495 GSM967517,0,148.671 GSM967518,0,327.103 GSM967519,0,220.483 GSM967520,0,288.137 GSM967521,0,267.117 GSM967535,0,584.148 GSM967536,0,440.939 GSM967537,0,593.828 GSM967538,0,363.922 GSM967539,0,517.958 GSM967540,0,229.544 GSM967541,0,678.981 GSM967542,0,145.398 GSM967543,0,361.209 GSM967544,0,365.108 GSM967545,0,155.828 GSM967546,0,179.459 GSM967547,0,458.462 GSM967548,0,295.888 GSM967549,0,317.083 GSM967550,0,359.458 GSM967551,0,289.574 GSM967552,0,239.661 GSM967553,0,289.83 GSM967554,0,406.821 GSM967555,0,189.09 GSM967556,0,145.182 GSM967557,0,189.178
| Synonyms | SMF;Sm-F;snRNP-F |
| Description | small nuclear ribonucleoprotein polypeptide F |
|---|---|
| Chromosome | 12q23.1 |
| Database Reference | MIM:603541 HGNC:11162 HPRD:04645 Vega:OTTHUMG00000170351 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SNRPF expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 1,197.254 | 1,338.559 | 2,274.34 |
| LNCaP cell | 148.671 | 243.8 | 327.103 |
| NG2-sorted cell from blood | 229.544 | 479.448 | 593.828 |
| PC3 cell | 145.398 | 363.159 | 678.981 |
| Primary melanocyte | 155.828 | 167.643 | 179.459 |
| SKMEL5 cell | 295.888 | 338.27 | 458.462 |
| T24 cell | 239.661 | 289.702 | 406.821 |
| UACC257 cell | 145.182 | 189.09 | 189.178 |
| Comparing SNRPF expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 1.37929395306036e-05 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.000593562124351236 |
| Embryonic stem cell VS PC3 cell | 0.0069426740806189 |
| Embryonic stem cell VS Primary melanocyte | 0.00459637778072509 |
| Embryonic stem cell VS SKMEL5 cell | 0.000622742141400243 |
| Embryonic stem cell VS T24 cell | 0.000418681471888485 |
| Embryonic stem cell VS UACC257 cell | 0.000424939662943767 |
| LNCaP cell VS NG2-sorted cell from blood | 0.0479225068332078 |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
