ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Hoxc11

Full Name:

homeo box C11

Alias:

Hox-3.7

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

15 F3|15 57.4 cM

Physical Location:

102784956-102787131 on NC_000081.5

Gene Type:

protein-coding

Human Ortholog:

GeneID: 3227 Symbol (Name): HOXC11 (homeobox C11)

Ortholog Status:

The human GeneID 3227 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Lore5	Alcohol-induced Loss of Righting Reflex	15		18.8-61.7 (cM)	4		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_001024842.1	NP_001020013.1	NC_000081.5 range: 102784956..102787131

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005634	nucleus	Cellular Component	IEA
GO:0043565	sequence-specific DNA binding	Molecular Function	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0003700	transcription factor activity	Molecular Function	IEA
GO:0001501	skeletal development	Biological Process	IGI (12869760)
GO:0042733	embryonic digit morphogenesis	Biological Process	IGI (12869760)
GO:0009954	proximal/distal pattern formation	Biological Process	IGI (12869760)
GO:0009952	anterior/posterior pattern formation	Biological Process	IGI (12869760)
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	IEA
GO:0006350	transcription	Biological Process	IEA
GO:0001759	induction of an organ	Biological Process	IGI (12050119)
GO:0001656	metanephros development	Biological Process	IGI (12050119)
GO:0045449	regulation of transcription	Biological Process	IEA