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Gene Information
Gene ID:11039
Symbol:SMA4
Alias:FLJ36702|MGC22265|MGC60382|SMA3|b55C20.2
Organism:Homo sapiens (Human)
Chromosome:5
Genetic Location:5q13
Physical Location:69550766-69557377 on NC_000005.8, complement
Gene Type:pseudo
Orthologs:This gene has no orthologs in other dataset(s).
Gene in Ethanol Study Datasets
Linkage Dataset
MarkerLODP valueLocation (bp)
D5S647  66282906
Region:66282906-76193808
Phenotype:Alcoholism phenotype along with age, gender, and P300 or constraint
Name:15211641
Method:Linkage
Publication:Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed
Summary:A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb).
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
--NC_000005.8 range: 69550766..69557377, complement
Gene Ontology (GO) Annotation
GO IDGO TermCategoryEvidence (PubMed)
GO:0005575cellular_componentCellular ComponentND
GO:0003674molecular_functionMolecular FunctionND
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compoundsMolecular FunctionIEA
GO:0001501skeletal developmentBiological ProcessTAS (7977382)
GO:0005975carbohydrate metabolic processBiological ProcessIEA
GO:0007399nervous system developmentBiological ProcessTAS (7977382)
GO:0008150biological_processBiological ProcessND
Other Database Cross Links
NCBI Entrez Gene:11039
HGNC:
Ensembl:ENSG00000205570
MIM:
HPRD:15404
HuGE Navigator:11039
dbSNP:SMA4
GeneCard:SMA4
AceView:SMA4