ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Lmx1a

Full Name:

LIM homeobox transcription factor 1 alpha

Alias:

Lmx1.1|MGC129356|MGC129357|dr|dreher|sst

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

1 H2.3|1 88.2 cM

Physical Location:

169619688-169778863 on NC_000067.5

Gene Type:

protein-coding

Human Ortholog:

GeneID: 4009 Symbol (Name): LMX1A (LIM homeobox transcription factor 1, alpha)

Ortholog Status:

The human GeneID 4009 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Ap1q	Alcohol Preference Drinking	1	76	45-95 (cM)	4.5		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_033652.5	NP_387501.1	NC_000067.5 range: 169619688..169778863

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005634	nucleus	Cellular Component	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0043565	sequence-specific DNA binding	Molecular Function	IEA
GO:0008270	zinc ion binding	Molecular Function	IEA
GO:0046872	metal ion binding	Molecular Function	IEA
GO:0003700	transcription factor activity	Molecular Function	RCA (12466851)
GO:0007275	multicellular organismal development	Biological Process	RCA (12466851)
GO:0007411	axon guidance	Biological Process	IMP (15183721)
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	RCA (12466851)
GO:0006350	transcription	Biological Process	IEA
GO:0030182	neuron differentiation	Biological Process	IMP (15183721)
GO:0045449	regulation of transcription	Biological Process	IEA
GO:0045665	negative regulation of neuron differentiation	Biological Process	IMP (15148302)
GO:0007417	central nervous system development	Biological Process	IMP (15148302)