ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Agrn

Full Name:

agrin

Alias:

Agrin

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

4 E2|4 80.0 cM

Physical Location:

155539398-155559243 on NC_000070.5, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 375790 Symbol (Name): AGRN (agrin)

Ortholog Status:

The human GeneID 375790 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Ap3q	Alcohol Preference Drinking	4	75	65-ter (cM)	4.6		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_021604.2	NP_067617.2	NC_000070.5 range: 155539398..155559243, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005605	basal lamina	Cellular Component	IDA (11018052)
GO:0009986	cell surface	Cellular Component	IDA (11018052)
GO:0005615	extracellular space	Cellular Component	TAS (8653788)
GO:0005615	extracellular space	Cellular Component	IDA (9422725\|12165471)
GO:0030548	acetylcholine receptor regulator activity	Molecular Function	IDA (14622576)
GO:0007009	plasma membrane organization and biogenesis	Biological Process	IMP (8653788)
GO:0045213	neurotransmitter receptor metabolic process	Biological Process	IDA (14622576)
GO:0043113	receptor clustering	Biological Process	ISO
GO:0043113	receptor clustering	Biological Process	IMP (11395002)
GO:0043113	receptor clustering	Biological Process	IGI (12165471)
GO:0043113	receptor clustering	Biological Process	IDA (11018052\|17119023)
GO:0008582	regulation of synaptic growth at neuromuscular junction	Biological Process	IMP (11018052)
GO:0007528	neuromuscular junction development	Biological Process	IGI (12165471)
GO:0007268	synaptic transmission	Biological Process	IDA (8653788)
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Biological Process	IDA (9422725)