ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Casq1

Full Name:

calsequestrin 1

Alias:

CSQ|CSQ-1|CSQ1

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

1 H3|1 94.0 cM

Physical Location:

174140468-174149969 on NC_000067.5, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 844 Symbol (Name): CASQ1 (calsequestrin 1 (fast-twitch, skeletal muscle))

Ortholog Status:

The human GeneID 844 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Alcw1	Acute Alcohol Withdrawal	1	96	172.3-176.5 (Mb)	5.6	3.00E-07	Significant	PARC
Calw1/Alcdp1	Chronic Alcohol Withdrawal	1	96	89-106.3 (cM)	7.6	2.00E-09	Significant	PARC
Ap1q	Alcohol Preference Drinking	1	76	45-95 (cM)	4.5		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_009813.1	NP_033943.1	NC_000067.5 range: 174140468..174149969, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005615	extracellular space	Cellular Component	RCA (12466851)
GO:0005739	mitochondrion	Cellular Component	IDA (14651853)
GO:0016529	sarcoplasmic reticulum	Cellular Component	IDA (14728599)
GO:0016529	sarcoplasmic reticulum	Cellular Component	TAS (11784029)
GO:0033018	sarcoplasmic reticulum lumen	Cellular Component	IDA (16600288)
GO:0005509	calcium ion binding	Molecular Function	IEA
GO:0006937	regulation of muscle contraction	Biological Process	TAS (11784029)