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Gene Information
Gene ID:124565
Symbol:SLC38A10
Full Name:solute carrier family 38, member 10
Alias:FLJ35718|MGC15523|PP1744
Organism:Homo sapiens (Human)
Chromosome:17
Genetic Location:17q25.3
Physical Location:76833393-76883690 on NC_000017.9, complement
Gene Type:protein-coding
Orthologs:This gene has no orthologs in other dataset(s).
Gene in Ethanol Study Datasets
Linkage Dataset
MarkerLODP valueLocation (bp)
D17S928  77846128
Region:75846128-78774742
Phenotype:Alcoholism phenotype along with age, gender, and P300 or constraint
Name:15211641
Method:Linkage
Publication:Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed
Summary:A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb).
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
NM_001037984.1NP_001033073.1NC_000017.9 range: 76833393..76883690, complement
NM_138570.2NP_612637.1NC_000017.9 range: 76833393..76883690, complement
Gene Ontology (GO) Annotation
GO IDGO TermCategoryEvidence (PubMed)
GO:0016020membraneCellular ComponentIEA
GO:0016021integral to membraneCellular ComponentIEA
GO:0031402sodium ion bindingMolecular FunctionIEA
GO:0006811ion transportBiological ProcessIEA
GO:0006814sodium ion transportBiological ProcessIEA
GO:0006865amino acid transportBiological ProcessIEA
Other Database Cross Links
NCBI Entrez Gene:124565
HGNC:28237
Ensembl:ENSG00000157637
MIM:
HPRD:17506
HuGE Navigator:124565
dbSNP:SLC38A10
GeneCard:SLC38A10
AceView:SLC38A10