| Gene Information |
| Gene ID: | | 12821 |
| Symbol: | | Col17a1 |
| Full Name: | | collagen, type XVII, alpha 1 |
| Alias: | | BP180|Bpag|Bpag2 |
| Organism: | | Mus musculus (Mouse) |
| Chromosome: | | 19 |
| Genetic Location: | | 19 D1|19 49.0 cM |
| Physical Location: | | 47720851-47766583 on NC_000085.5, complement |
| Gene Type: | | protein-coding |
| Human Ortholog: | | GeneID: 1308 Symbol (Name): COL17A1 (collagen, type XVII, alpha 1) |
| Ortholog Status: | | The human GeneID 1308 is not in current human dataset. |
|
| Gene in Ethanol Study Datasets |
| QTL Information | | QTL | Phenotype | Chr | Peak (cM) | LOD | P Value | Range | Status | QTL Link | |
| Calw2/Alcdp2 | Chronic Alcohol Withdrawal | 19 | 47 | 36.5-ter (cM) | 5.3 | 6.00E-07 | Significant | PARC |
|
|
| Gene Refseq Sequence Annotation |
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| Gene Ontology (GO) Annotation |
| GO ID | GO Term | Category | Evidence (PubMed) | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005578 | proteinaceous extracellular matrix | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016021 | integral to membrane | Cellular Component | RCA (12466851) | |
| GO:0030056 | hemidesmosome | Cellular Component | IDA (8707838) | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0006817 | phosphate transport | Biological Process | IEA | |
|
| Other Database Cross Links |
| NCBI Entrez Gene: | | 12821 |
| MGI: | |
| Ensembl: | | ENSMUSG00000025064 |
| dbSNP: | | Col17a1 |
| AceView: | | Col17a1 |
