ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Galnt1

Full Name:

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

18 B1

Physical Location:

24363941-24444145 on NC_000084.5

Gene Type:

protein-coding

Human Ortholog:

GeneID: 2589 Symbol (Name): GALNT1 (UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1))

Ortholog Status:

The human GeneID 2589 is not in current human dataset.

Gene in Ethanol Study Datasets

Gene Information

Dataset Information

Name:		16783646
Method:		Microarray and QTL
Tissue:		Whole brain
Phenotype:		Alcohol preference, acute functional tolerance
Publication:		Saba et al. Mamm Genome. (2006) Candidate genes and their regulatory elements: alcohol preference and tolerance. PubMed
Summary:		Identified of 8 candidate genes for the trait of alcohol preference and 22 candidate genes for acute functional tolerance

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_013814.2	NP_038842.2	NC_000084.5 range: 24363941..24444145

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005576	extracellular region	Cellular Component	IEA
GO:0005615	extracellular space	Cellular Component	RCA (12466851)
GO:0005794	Golgi apparatus	Cellular Component	IEA
GO:0016021	integral to membrane	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0004653	polypeptide N-acetylgalactosaminyltransferase activity	Molecular Function	IDA (11278534\|12407114)
GO:0016757	transferase activity, transferring glycosyl groups	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0030145	manganese ion binding	Molecular Function	IEA
GO:0005529	sugar binding	Molecular Function	IEA
GO:0005509	calcium ion binding	Molecular Function	IEA
GO:0006493	protein amino acid O-linked glycosylation	Biological Process	IDA (11278534\|12407114)