ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Hoxc9

Full Name:

homeo box C9

Alias:

Hox-3.2

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

15 F3|15 57.4 cM

Physical Location:

102807462-102814874 on NC_000081.5

Gene Type:

protein-coding

Human Ortholog:

GeneID: 3225 Symbol (Name): HOXC9 (homeobox C9)

Ortholog Status:

The human GeneID 3225 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Lore5	Alcohol-induced Loss of Righting Reflex	15		18.8-61.7 (cM)	4		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_008272.3	NP_032298.1	NC_000081.5 range: 102807462..102814874

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005634	nucleus	Cellular Component	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0003700	transcription factor activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IPI (14973489)
GO:0043565	sequence-specific DNA binding	Molecular Function	IEA
GO:0016563	transcription activator activity	Molecular Function	IEA
GO:0045449	regulation of transcription	Biological Process	IEA
GO:0009952	anterior/posterior pattern formation	Biological Process	IGI (17626057)
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	IEA
GO:0006350	transcription	Biological Process	IEA
GO:0048706	embryonic skeletal development	Biological Process	IGI (17626057)