ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Lmx1b

Full Name:

LIM homeobox transcription factor 1 beta

Alias:

LMX1.1|LMX1.2|MGC159172

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

2 B|2 21.0 cM

Physical Location:

33420155-33496030 on NC_000068.6, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 4010 Symbol (Name): LMX1B (LIM homeobox transcription factor 1, beta)

Ortholog Status:

The human GeneID 4010 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Alcp1	Alcohol Preference Drinking	2	28	19-35 (cM)	5.3		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_010725.1	NP_034855.1	NC_000068.6 range: 33420155..33496030, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005634	nucleus	Cellular Component	IEA
GO:0046872	metal ion binding	Molecular Function	IEA
GO:0008270	zinc ion binding	Molecular Function	IEA
GO:0043565	sequence-specific DNA binding	Molecular Function	IEA
GO:0003700	transcription factor activity	Molecular Function	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0045449	regulation of transcription	Biological Process	IEA
GO:0043010	camera-type eye development	Biological Process	IMP (10660670)
GO:0030326	embryonic limb morphogenesis	Biological Process	NAS (10767331)
GO:0030199	collagen fibril organization	Biological Process	IMP (10660670)
GO:0030182	neuron differentiation	Biological Process	IMP (12897786\|15229182)
GO:0021954	central nervous system neuron development	Biological Process	IMP (17151281)
GO:0009953	dorsal/ventral pattern formation	Biological Process	IEP (10767331)
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	IEA
GO:0006350	transcription	Biological Process	IEA
GO:0001764	neuron migration	Biological Process	IMP (15229182)