ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Plod1

Full Name:

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1

Alias:

2410042F05Rik|AI854890|AV007929|LH1|Plod

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

4 E2|4 76.5 cM

Physical Location:

147284169-147310812 on NC_000070.5, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 5351 Symbol (Name): PLOD1 (procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1)

Ortholog Status:

The human GeneID 5351 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Ap3q	Alcohol Preference Drinking	4	75	65-ter (cM)	4.6		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_011122.2	NP_035252.1	NC_000070.5 range: 147284169..147310812, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005615	extracellular space	Cellular Component	RCA (12466851)
GO:0005783	endoplasmic reticulum	Cellular Component	RCA (12466851)
GO:0016020	membrane	Cellular Component	RCA (12466851)
GO:0005506	iron ion binding	Molecular Function	IEA
GO:0031418	L-ascorbic acid binding	Molecular Function	IEA
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	Molecular Function	IEA
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Molecular Function	RCA (12466851)
GO:0016491	oxidoreductase activity	Molecular Function	RCA (12466851)
GO:0008475	procollagen-lysine 5-dioxygenase activity	Molecular Function	RCA (12466851)
GO:0046872	metal ion binding	Molecular Function	IEA
GO:0019538	protein metabolic process	Biological Process	IEA