ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Rag1

Full Name:

recombination activating gene 1

Alias:

Rag-1

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

2 E2|2 56.0 cM

Physical Location:

101478408-101489688 on NC_000068.6, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 5896 Symbol (Name): RAG1 (recombination activating gene 1)

Ortholog Status:

The human GeneID 5896 is also in human dataset(s).

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Etact1	Alcohol Stimulated Activity	2	51	41-61 (cM)	3.9	2.20E-05	Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_009019.2	NP_033045.2	NC_000068.6 range: 101478408..101489688, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005634	nucleus	Cellular Component	IEA
GO:0005622	intracellular	Cellular Component	IEA
GO:0003676	nucleic acid binding	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0008270	zinc ion binding	Molecular Function	IEA
GO:0046872	metal ion binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0004519	endonuclease activity	Molecular Function	IEA
GO:0004518	nuclease activity	Molecular Function	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0016265	death	Biological Process	IMP (10201940)
GO:0030183	B cell differentiation	Biological Process	IDA (11976687)
GO:0033077	T cell differentiation in the thymus	Biological Process	IMP (9215624)
GO:0033151	V(D)J recombination	Biological Process	IGI (2360047)
GO:0006310	DNA recombination	Biological Process	TAS (12606021)