ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

19411

Symbol:

Rarg

Full Name:

retinoic acid receptor, gamma

Alias:

AI385767|MGC11555|MGC18523|Nr1b3|RARD|RARgamma2

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

15 E-F3|15 57.4 cM

Physical Location:

102065370-102087913 on NC_000081.5, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 5916 Symbol (Name): RARG (retinoic acid receptor, gamma)

Ortholog Status:

The human GeneID 5916 is also in human dataset(s).

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Lore5	Alcohol-induced Loss of Righting Reflex	15		18.8-61.7 (cM)	4		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_001042727.1	NP_001036192.1	NC_000081.5 range: 102065370..102087913, complement
NM_011244.3	NP_035374.3	NC_000081.5 range: 102065370..102087913, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005634	nucleus	Cellular Component	IDA (15327771)
GO:0005667	transcription factor complex	Cellular Component	IDA (15327771)
GO:0046872	metal ion binding	Molecular Function	IEA
GO:0043565	sequence-specific DNA binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IPI (15327771)
GO:0004879	ligand-dependent nuclear receptor activity	Molecular Function	IEA
GO:0004872	receptor activity	Molecular Function	IEA
GO:0003708	retinoic acid receptor activity	Molecular Function	IEA
GO:0003707	steroid hormone receptor activity	Molecular Function	IEA
GO:0003700	transcription factor activity	Molecular Function	IDA (8152920)
GO:0003677	DNA binding	Molecular Function	IDA (15327771)
GO:0008270	zinc ion binding	Molecular Function	IEA
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Biological Process	IDA (15327771\|15734736)
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Biological Process	IGI (15766748)
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	Biological Process	IDA (8152920)
GO:0043068	positive regulation of programmed cell death	Biological Process	IGI (10075839)
GO:0043065	positive regulation of apoptosis	Biological Process	IGI (16207763)
GO:0035116	embryonic hindlimb morphogenesis	Biological Process	IGI (10075839)
GO:0008285	negative regulation of cell proliferation	Biological Process	IGI (10075839)
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	IEA
GO:0006350	transcription	Biological Process	IEA
GO:0048048	embryonic eye morphogenesis	Biological Process	IGI (16207763)