ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Upf1

Full Name:

UPF1 regulator of nonsense transcripts homolog (yeast)

Alias:

B430202H16Rik|NORF1|PNORF-1|Rent1|Upflp

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

8 B3.3|8 33.5 cM

Physical Location:

72855423-72877177 on NC_000074.5, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 5976 Symbol (Name): UPF1 (UPF1 regulator of nonsense transcripts homolog (yeast))

Ortholog Status:

The human GeneID 5976 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Caws3/Alcw6	Chronic Alcohol Withdrawal	8		16-43 (cM)	3.5	0.0003	Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_030680.2	NP_109605.2	NC_000074.5 range: 72855423..72877177, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0004386	helicase activity	Molecular Function	IEA
GO:0005524	ATP binding	Molecular Function	IEA
GO:0008270	zinc ion binding	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0046872	metal ion binding	Molecular Function	IEA
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Biological Process	IEA