ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

20356

Symbol:

Sema5a

Full Name:

sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A

Alias:

5930434A13|9130201M22Rik|AI464145|Semaf|semF

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

15 B3.1|15 19.7 cM

Physical Location:

32174567-32626095 on NC_000081.5

Gene Type:

protein-coding

Human Ortholog:

GeneID: 9037 Symbol (Name): SEMA5A (sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A)

Ortholog Status:

The human GeneID 9037 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Lore5	Alcohol-induced Loss of Righting Reflex	15		18.8-61.7 (cM)	4		Significant	PARC
Aaq1/Etacc	Alcohol Acceptance	15	30	15-48 (cM)	3.8		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_009154.2	NP_033180.2	NC_000081.5 range: 32174567..32626095

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0016020	membrane	Cellular Component	IEA
GO:0016021	integral to membrane	Cellular Component	RCA (16141072)
GO:0016021	integral to membrane	Cellular Component	IDA (12506007)
GO:0008046	axon guidance receptor activity	Molecular Function	IDA (12506007)
GO:0030154	cell differentiation	Biological Process	IEA
GO:0001569	patterning of blood vessels	Biological Process	IMP (15743826)
GO:0007411	axon guidance	Biological Process	IMP (12506007)
GO:0007399	nervous system development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0048754	branching morphogenesis of a tube	Biological Process	IMP (15743826)