ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Sst

Full Name:

somatostatin

Alias:

SOM|SRIF|SS|Smst

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

16 cen-C3|16 19.0 cM

Physical Location:

23889666-23890929 on NC_000082.5, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 6750 Symbol (Name): SST (somatostatin)

Ortholog Status:

The human GeneID 6750 is also in human dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

Sst

Dataset Information

Name:		16618939
Method:		Microarray
Tissue:		Whole brain
Phenotype:		Alcohol preference
Publication:		Mulligan et al. Proc Natl Acad Sci U S A. (2006) Toward understanding the genetics of alcohol drinking through transcriptome meta-analysis. PubMed
Summary:		Microarray analyses of brain gene expression in three selected lines, and six isogenic strains of mice known to differ markedly in voluntary alcohol consumption provided >4.5 million data points for a meta-analysis. A total of 107 arrays were obtained and arranged into six experimental data sets, allowing the identification of 3,800 unique genes significantly and consistently changed between all models of high or low amounts of alcohol consumption. Here we select the 75 genes with the largest effect size (\|d\|) and lowest Q values.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_009215.1	NP_033241.1	NC_000082.5 range: 23889666..23890929, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005576	extracellular region	Cellular Component	RCA (12466851)
GO:0005615	extracellular space	Cellular Component	RCA (12466851)
GO:0005179	hormone activity	Molecular Function	RCA (12466851)
GO:0030334	regulation of cell migration	Biological Process	IDA (11780120)