ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Ush2a

Full Name:

Usher syndrome 2A (autosomal recessive, mild) homolog (human)

Alias:

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

1 H6|1 106.3 cM

Physical Location:

190086912-190788806 on NC_000067.5

Gene Type:

protein-coding

Human Ortholog:

GeneID: 7399 Symbol (Name): USH2A (Usher syndrome 2A (autosomal recessive, mild))

Ortholog Status:

The human GeneID 7399 is also in human dataset(s).

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Calw1/Alcdp1	Chronic Alcohol Withdrawal	1	96	89-106.3 (cM)	7.6	2.00E-09	Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_021408.3	NP_067383.3	NC_000067.5 range: 190086912..190788806

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0016021	integral to membrane	Cellular Component	IEA
GO:0005576	extracellular region	Cellular Component	IEA
GO:0005578	proteinaceous extracellular matrix	Cellular Component	RCA (12466851)
GO:0005604	basement membrane	Cellular Component	IDA (14676276)
GO:0005615	extracellular space	Cellular Component	RCA (12466851)
GO:0042995	cell projection	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0032421	stereocilium bundle	Cellular Component	IDA (17360538)
GO:0016324	apical plasma membrane	Cellular Component	IDA (17360538)
GO:0005518	collagen binding	Molecular Function	IDA (14676276)
GO:0007601	visual perception	Biological Process	IEA
GO:0045494	photoreceptor cell maintenance	Biological Process	IMP (17360538)
GO:0050896	response to stimulus	Biological Process	IEA
GO:0060113	inner ear receptor cell differentiation	Biological Process	IMP (17360538)