ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

ALDH9A1

Full Name:

aldehyde dehydrogenase 9 family, member A1

Alias:

ALDH4|ALDH7|ALDH9|E3|TMABADH

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

1q23.1

Physical Location:

163898072-163934523 on NC_000001.9, complement

Gene Type:

protein-coding

Orthologs:

This gene has Mouse: 56752 ortholog(s) in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

ALDH9A1

Dataset Information

Name:		Literature Search
Method:		Literature search
Summary:		We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive.

Linkage Dataset

Marker

LOD

P value

Location (bp)

D1S2878

163669990

Region:		163669990-165871089
Phenotype:		Alcoholism phenotype along with age, gender, and P300 or constraint
Name:		15211641
Method:		Linkage
Publication:		Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed
Summary:		A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb).

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_000696.3	NP_000687.3	NC_000001.9 range: 163898072..163934523, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005737	cytoplasm	Cellular Component	TAS (2925663)
GO:0004029	aldehyde dehydrogenase (NAD) activity	Molecular Function	IDA (2925663)
GO:0016491	oxidoreductase activity	Molecular Function	IEA
GO:0019145	aminobutyraldehyde dehydrogenase activity	Molecular Function	IDA (2925663\|8645224)
GO:0047105	4-trimethylammoniobutyraldehyde dehydrogenase activity	Molecular Function	IEA
GO:0006081	aldehyde metabolic process	Biological Process	IDA (8645224)
GO:0042136	neurotransmitter biosynthetic process	Biological Process	IDA (2925663)
GO:0042445	hormone metabolic process	Biological Process	TAS (2925663)
GO:0055114	oxidation reduction	Biological Process	IDA (2925663)