ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

HLA-DQA1

Full Name:

major histocompatibility complex, class II, DQ alpha 1

Alias:

CD|CELIAC1|DQ-A1|FLJ27088|FLJ27328|GSE|HLA DQA1|HLA-DQA|MGC149527

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

6p21.3

Physical Location:

32713160-32719406 on NC_000006.10

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

HLA-DQA1

Dataset Information

Name:		Literature Search
Method:		Literature search
Summary:		We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_002122.3	NP_002113.2	NC_000006.10 range: 32713160..32719406

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0042613	MHC class II protein complex	Cellular Component	IEA
GO:0016021	integral to membrane	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005887	integral to plasma membrane	Cellular Component	NAS (3584986\|6415485)
GO:0005886	plasma membrane	Cellular Component	EXP (11048639\|11827988\|15489916\|17652306)
GO:0032395	MHC class II receptor activity	Molecular Function	NAS (3584986\|6415485)
GO:0032395	MHC class II receptor activity	Molecular Function	TAS (2300572)
GO:0006955	immune response	Biological Process	IEA
GO:0006955	immune response	Biological Process	NAS (3584986\|6415485)
GO:0019882	antigen processing and presentation	Biological Process	IEA
GO:0002504	antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	Biological Process	IEA