ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

PDX1

Full Name:

pancreatic and duodenal homeobox 1

Alias:

GSF|IDX-1|IPF1|IUF1|MODY4|PDX-1|STF-1

Organism:

Homo sapiens (Human)

Chromosome:

13

Genetic Location:

13q12.1

Physical Location:

27392156-27397393 on NC_000013.9

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

PDX1

Dataset Information

Name:		Literature Search
Method:		Literature search
Summary:		We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_000209.3	NP_000200.1	NC_000013.9 range: 27392156..27397393

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005634	nucleus	Cellular Component	IEA
GO:0003700	transcription factor activity	Molecular Function	IEA
GO:0043565	sequence-specific DNA binding	Molecular Function	IEA
GO:0003704	specific RNA polymerase II transcription factor activity	Molecular Function	TAS (8954967)
GO:0006091	generation of precursor metabolites and energy	Biological Process	TAS (8954967)
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009887	organ morphogenesis	Biological Process	TAS (8988180)
GO:0030073	insulin secretion	Biological Process	IDA (17941991)
GO:0007263	nitric oxide mediated signal transduction	Biological Process	IDA (17941991)

Other Database Cross Links

NCBI Entrez Gene:

HGNC:

Ensembl:

ENSG00000139515

MIM:

HPRD:

HuGE Navigator:

dbSNP:

GeneCard:

AceView: