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Gene Information
Gene ID:3902
Symbol:LAG3
Full Name:lymphocyte-activation gene 3
Alias:CD223
Organism:Homo sapiens (Human)
Chromosome:12
Genetic Location:12p13.32
Physical Location:6751930-6757879 on NC_000012.10
Gene Type:protein-coding
Orthologs:This gene has no orthologs in other dataset(s).
Gene in Ethanol Study Datasets
Linkage Dataset
MarkerLODP valueLocation (bp)
D12S99  5434815
Region:3434815-7434815
Phenotype:Alcoholism phenotype along with age, gender, and P300 or constraint
Name:15211641
Method:Linkage
Publication:Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed
Summary:A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb).
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
NM_002286.5NP_002277.4NC_000012.10 range: 6751930..6757879
Gene Ontology (GO) Annotation
GO IDGO TermCategoryEvidence (PubMed)
GO:0005887integral to plasma membraneCellular ComponentNR
GO:0016020membraneCellular ComponentIEA
GO:0003823antigen bindingMolecular FunctionTAS (1692078)
GO:0042289MHC class II protein bindingMolecular FunctionIDA (9159144)
Other Database Cross Links
NCBI Entrez Gene:3902
HGNC:6476
Ensembl:ENSG00000089692
MIM:153337
HPRD:01077
HuGE Navigator:3902
dbSNP:LAG3
GeneCard:LAG3
AceView:LAG3