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Gene Information
Gene ID:51006
Symbol:SLC35C2
Full Name:solute carrier family 35, member C2
Alias:BA394O2.1|C20orf5|CGI-15|FLJ37039|MGC20633|MGC32079|MGC39183|OVCOV1
Organism:Homo sapiens (Human)
Chromosome:20
Genetic Location:20q13.12
Physical Location:44415395-44415757 on NC_000020.9, complement
Gene Type:protein-coding
Orthologs:This gene has no orthologs in other dataset(s).
Gene in Ethanol Study Datasets
Linkage Dataset
MarkerLODP valueLocation (bp)
D20S119  43082264
Region:41082264-45082264
Phenotype:Alcoholism phenotype along with age, gender, and P300 or constraint
Name:15211641
Method:Linkage
Publication:Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed
Summary:A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb).
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
XM_001722102.1XP_001722154.1NC_000020.9 range: 44415395..44415757, complement
NM_015945.10NP_057029.8NC_000020.9 range: 44411583..44426470, complement
NM_173073.2NP_775096.1NC_000020.9 range: 44411583..44426470, complement
NM_173179.2NP_775271.1NC_000020.9 range: 44411583..44426470, complement
Gene Ontology (GO) Annotation
GO IDGO TermCategoryEvidence (PubMed)
GO:0016020membraneCellular ComponentIEA
GO:0016021integral to membraneCellular ComponentIEA
GO:0006810transportBiological ProcessIEA
Other Database Cross Links
NCBI Entrez Gene:51006
HGNC:17117
Ensembl:ENSG00000080189
MIM:
HPRD:15371
HuGE Navigator:51006
dbSNP:SLC35C2
GeneCard:SLC35C2
AceView:SLC35C2