ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

D4Ertd196e

Full Name:

DNA segment, Chr 4, ERATO Doi 196, expressed

Alias:

5730406H10Rik|AA409341|DKFZp564D0478

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

4 D2.3|4 65.7 cM

Physical Location:

132821961-132833701 on NC_000070.5, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 84065 Symbol (Name): C1orf160 (chromosome 1 open reading frame 160)

Ortholog Status:

The human GeneID 84065 is not in current human dataset.

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

D4Ertd196e

Dataset Information

Name:		16618939
Method:		Microarray
Tissue:		Whole brain
Phenotype:		Alcohol preference
Publication:		Mulligan et al. Proc Natl Acad Sci U S A. (2006) Toward understanding the genetics of alcohol drinking through transcriptome meta-analysis. PubMed
Summary:		Microarray analyses of brain gene expression in three selected lines, and six isogenic strains of mice known to differ markedly in voluntary alcohol consumption provided >4.5 million data points for a meta-analysis. A total of 107 arrays were obtained and arranged into six experimental data sets, allowing the identification of 3,800 unique genes significantly and consistently changed between all models of high or low amounts of alcohol consumption. Here we select the 75 genes with the largest effect size (\|d\|) and lowest Q values.

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Ap3q	Alcohol Preference Drinking	4	75	65-ter (cM)	4.6		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_025667.3	NP_079943.2	NC_000070.5 range: 132821961..132833701, complement

Gene Ontology (GO) Annotation