| Gene Information |
| Gene ID: | | 5360 |
| Symbol: | | PLTP |
| Full Name: | | phospholipid transfer protein |
| Alias: | | HDLCQ9 |
| Organism: | | Homo sapiens (Human) |
| Chromosome: | | 20 |
| Genetic Location: | | 20q12-q13.1 |
| Physical Location: | | 43960803-43974192 on NC_000020.9, complement |
| Gene Type: | | protein-coding |
| Orthologs: | | This gene has no orthologs in other dataset(s). |
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| Gene in Ethanol Study Datasets |
| Gene Information | | | Dataset Information | | Name: | | Literature Search | | Method: | | Literature search | | Summary: | | We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive. |
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| Linkage Dataset | | Marker | LOD | P value | Location (bp) | |
| D20S119 | | | 43082264 | | Region: | | 41082264-45082264 | | Phenotype: | | Alcoholism phenotype along with age, gender, and P300 or constraint | | Name: | | 15211641 | | Method: | | Linkage | | Publication: | | Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed | | Summary: | | A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb). |
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| Gene Refseq Sequence Annotation |
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| Gene Ontology (GO) Annotation |
| GO ID | GO Term | Category | Evidence (PubMed) | |
| GO:0005576 | extracellular region | Cellular Component | TAS (7654777) | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0006629 | lipid metabolic process | Biological Process | TAS (7654777) | |
| GO:0006869 | lipid transport | Biological Process | IEA | |
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| Other Database Cross Links |
| NCBI Entrez Gene: | | 5360 |
| HGNC: | | 9093 |
| Ensembl: | | ENSG00000100979 |
| MIM: | | 172425 |
| HPRD: | | 01399 |
| HuGE Navigator: | | 5360 |
| dbSNP: | | PLTP |
| GeneCard: | | PLTP |
| AceView: | | PLTP |
