ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Smarcal1

Full Name:

Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1

Alias:

6030401P21Rik|Mharp

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

1 C3|1 40.0 cM

Physical Location:

72629844-72679707 on NC_000067.5

Gene Type:

protein-coding

Human Ortholog:

GeneID: 50485 Symbol (Name): SMARCAL1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1)

Ortholog Status:

The human GeneID 50485 is not in current human dataset.

Gene in Ethanol Study Datasets

QTL Information

QTL	Phenotype	Chr	Peak (cM)	LOD	P Value	Range	Status	QTL Link
Caws1/Alcw5	Chronic Alcohol Withdrawal	1		28-47 (cM)	6.5	3.00E-07	Significant	PARC
Lore1	Alcohol-induced Loss of Righting Reflex	1		36.9-41 (cM)	5.4		Significant	PARC

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_018817.1	NP_061287.1	NC_000067.5 range: 72629844..72679707

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005634	nucleus	Cellular Component	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0003676	nucleic acid binding	Molecular Function	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0004386	helicase activity	Molecular Function	IEA
GO:0005524	ATP binding	Molecular Function	IEA
GO:0008094	DNA-dependent ATPase activity	Molecular Function	IDA (10857751)
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0016568	chromatin modification	Biological Process	IEA