ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

RHO

Full Name:

rhodopsin

Alias:

MGC138309|MGC138311|OPN2|RP4

Organism:

Homo sapiens (Human)

Chromosome:

3

Genetic Location:

3q21-q24

Physical Location:

130730171-130736876 on NC_000003.10

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

RHO

Dataset Information

Name:		Literature Search
Method:		Literature search
Summary:		We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_000539.3	NP_000530.1	NC_000003.10 range: 130730171..130736876

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005886	plasma membrane	Cellular Component	IDA (11256614)
GO:0005887	integral to plasma membrane	Cellular Component	TAS (8253795)
GO:0001584	rhodopsin-like receptor activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IPI (17693260)
GO:0009881	photoreceptor activity	Molecular Function	IEA
GO:0018298	protein-chromophore linkage	Biological Process	IEA
GO:0016056	rhodopsin mediated signaling pathway	Biological Process	TAS (8107847)
GO:0007603	phototransduction, visible light	Biological Process	TAS (1418997)
GO:0007601	visual perception	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0050896	response to stimulus	Biological Process	IEA

Other Database Cross Links

NCBI Entrez Gene:

HGNC:

Ensembl:

ENSG00000163914

MIM:

HPRD:

HuGE Navigator:

dbSNP:

GeneCard:

AceView: