Logo
Home Search BLAST Integration Document Link Support Citation

Gene Information
Gene ID:6352
Symbol:CCL5
Full Name:chemokine (C-C motif) ligand 5
Alias:D17S136E|MGC17164|RANTES|SCYA5|SISd|TCP228
Organism:Homo sapiens (Human)
Chromosome:17
Genetic Location:17q11.2-q12
Physical Location:31222607-31231489 on NC_000017.9, complement
Gene Type:protein-coding
Orthologs:This gene has no orthologs in other dataset(s).
Gene in Ethanol Study Datasets
Gene Information
Original ID1:CCL5
Dataset Information
Name:Literature Search
Method:Literature search
Summary:We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive.
Gene Information
Original IDNo. of PublicationsPhenotype
CCL51Alcohol-Induced Disorders
CCL51Alcohol-Related Disorders
HuGE Navigator Dataset
Name:HuGE Navigator
Method:Literature data mining
Publication:Wei Yu, Melinda Clyne, Anja Wulf, Ajay Yesupriya, Marta Gwinn and Muin J. Khoury. Phenopedia. HuGE Navigator. Available at: http://www.hugenavigator.net/HuGENavigator/startPagePhenoPedia.do. Accessed [Jun. 10, 2008].
Summary:HuGE Navigator Phenopedia provides a disease-centered view of genetic association studies summarized in the online Human Genome Epidemiology (HuGE) encyclopedia. We extracted genes associated to 9 Alcohol-related diseases (Alcohol Amnestic Disorder; Alcohol Withdrawal Delirium; Alcohol Withdrawal Seizures; Alcohol-Induced Disorders; Alcohol-Induced Disorders, Nervous System; Alcohol-Related Disorders; Alcoholic Intoxication; Alcoholic Neuropathy; Alcoholism) from HuGE Navigator Phenopedia.
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
NM_002985.2NP_002976.2NC_000017.9 range: 31222607..31231489, complement
Gene Ontology (GO) Annotation
GO IDGO TermCategoryEvidence (PubMed)
GO:0005576extracellular regionCellular ComponentIEA
GO:0005615extracellular spaceCellular ComponentIEA
GO:0004871signal transducer activityMolecular FunctionTAS (10734056|10770925)
GO:0008009chemokine activityMolecular FunctionTAS (10770925)
GO:0042056chemoattractant activityMolecular FunctionIDA (15001559)
GO:0009615response to virusBiological ProcessTAS (10583963|10640778)
GO:0007267cell-cell signalingBiological ProcessTAS (10734056)
GO:0007165signal transductionBiological ProcessTAS (10770925)
GO:0007155cell adhesionBiological ProcessTAS (10910894)
GO:0006979response to oxidative stressBiological ProcessTAS (10713092)
GO:0006968cellular defense responseBiological ProcessTAS (10640778)
GO:0006955immune responseBiological ProcessTAS (10713092)
GO:0006954inflammatory responseBiological ProcessTAS (10415069)
GO:0006935chemotaxisBiological ProcessTAS (10713092)
GO:0006928cell motilityBiological ProcessTAS (9558100)
GO:0006887exocytosisBiological ProcessTAS (10734056)
GO:0006874cellular calcium ion homeostasisBiological ProcessTAS (10713092)
GO:0045071negative regulation of viral genome replicationBiological ProcessIDA (10490959)
Other Database Cross Links
NCBI Entrez Gene:6352
HGNC:10632
Ensembl:ENSG00000161570
MIM:187011
HPRD:01751
HuGE Navigator:6352
dbSNP:CCL5
GeneCard:CCL5
AceView:CCL5