ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

STK4

Full Name:

serine/threonine kinase 4

Alias:

DKFZp686A2068|KRS2|MST1|YSK3

Organism:

Homo sapiens (Human)

Chromosome:

20

Genetic Location:

20q11.2-q13.2

Physical Location:

43028533-43142007 on NC_000020.9

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Linkage Dataset

Marker

LOD

P value

Location (bp)

D20S119

43082264

Region:		41082264-45082264
Phenotype:		Alcoholism phenotype along with age, gender, and P300 or constraint
Name:		15211641
Method:		Linkage
Publication:		Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed
Summary:		A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb).

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_006282.2	NP_006273.1	NC_000020.9 range: 43028533..43142007

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0042803	protein homodimerization activity	Molecular Function	IDA (11805089)
GO:0005524	ATP binding	Molecular Function	NAS
GO:0005524	ATP binding	Molecular Function	IDA (8566796)
GO:0004713	protein-tyrosine kinase activity	Molecular Function	NAS (8274451)
GO:0004674	protein serine/threonine kinase activity	Molecular Function	IDA (8566796\|16751106)
GO:0000287	magnesium ion binding	Molecular Function	IDA (8566796)
GO:0008134	transcription factor binding	Molecular Function	IPI (16751106)
GO:0043065	positive regulation of apoptosis	Biological Process	IDA (15109305)
GO:0018105	peptidyl-serine phosphorylation	Biological Process	IDA (16751106)
GO:0007243	protein kinase cascade	Biological Process	IDA (8566796)
GO:0007166	cell surface receptor linked signal transduction	Biological Process	NAS (8274451)
GO:0007165	signal transduction	Biological Process	TAS (7665586\|8816758)
GO:0006468	protein amino acid phosphorylation	Biological Process	NAS
GO:0000902	cell morphogenesis	Biological Process	IDA (11805089)
GO:0046777	protein amino acid autophosphorylation	Biological Process	IDA (11805089)

Other Database Cross Links

NCBI Entrez Gene:

HGNC:

Ensembl:

ENSG00000101109

MIM:

HPRD:

HuGE Navigator:

dbSNP:

GeneCard:

AceView: