ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

Svop

Full Name:

SV2 related protein

Alias:

1110030H18Rik|AI415691

Organism:

Mus musculus (Mouse)

Chromosome:

Genetic Location:

5 F

Physical Location:

114476921-114541388 on NC_000071.5, complement

Gene Type:

protein-coding

Human Ortholog:

GeneID: 55530 Symbol (Name): SVOP (SV2 related protein homolog (rat))

Ortholog Status:

The human GeneID 55530 is not in current human dataset.

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

1110030H18Rik

Dataset Information

Name:		16618939
Method:		Microarray
Tissue:		Whole brain
Phenotype:		Alcohol preference
Publication:		Mulligan et al. Proc Natl Acad Sci U S A. (2006) Toward understanding the genetics of alcohol drinking through transcriptome meta-analysis. PubMed
Summary:		Microarray analyses of brain gene expression in three selected lines, and six isogenic strains of mice known to differ markedly in voluntary alcohol consumption provided >4.5 million data points for a meta-analysis. A total of 107 arrays were obtained and arranged into six experimental data sets, allowing the identification of 3,800 unique genes significantly and consistently changed between all models of high or low amounts of alcohol consumption. Here we select the 75 genes with the largest effect size (\|d\|) and lowest Q values.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_026805.1	NP_081081.1	NC_000071.5 range: 114476921..114541388, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0016020	membrane	Cellular Component	RCA (12466851)
GO:0016021	integral to membrane	Cellular Component	IEA
GO:0030054	cell junction	Cellular Component	IEA
GO:0031410	cytoplasmic vesicle	Cellular Component	IEA
GO:0045202	synapse	Cellular Component	IEA
GO:0005215	transporter activity	Molecular Function	RCA (12466851)
GO:0015075	ion transmembrane transporter activity	Molecular Function	IEA
GO:0006810	transport	Biological Process	RCA (12466851)
GO:0006811	ion transport	Biological Process	IEA