ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

TBP

Full Name:

TATA box binding protein

Alias:

GTF2D|GTF2D1|MGC117320|MGC126054|MGC126055|SCA17|TFIID

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

6q27

Physical Location:

170705395-170723871 on NC_000006.10

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

TBP

Dataset Information

Name:		Literature Search
Method:		Literature search
Summary:		We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_003194.3	NP_003185.1	NC_000006.10 range: 170705395..170723871

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005669	transcription factor TFIID complex	Cellular Component	IEA
GO:0005669	transcription factor TFIID complex	Cellular Component	IDA (14580349)
GO:0005634	nucleus	Cellular Component	IEA
GO:0005654	nucleoplasm	Cellular Component	EXP (1939271\|2449431\|8946909)
GO:0003677	DNA binding	Molecular Function	IEA
GO:0016251	general RNA polymerase II transcription factor activity	Molecular Function	TAS (2363050)
GO:0005515	protein binding	Molecular Function	IPI (1465435\|7680771\|8006019\|9045704\|9748258\|10391676\|12040021\|12217962)
GO:0005488	binding	Molecular Function	IEA
GO:0003702	RNA polymerase II transcription factor activity	Molecular Function	IEA
GO:0008219	cell death	Biological Process	IEA
GO:0006368	RNA elongation from RNA polymerase II promoter	Biological Process	EXP (9405375)
GO:0006367	transcription initiation from RNA polymerase II promoter	Biological Process	TAS (2363050)
GO:0006367	transcription initiation from RNA polymerase II promoter	Biological Process	IEA
GO:0006367	transcription initiation from RNA polymerase II promoter	Biological Process	EXP (8946909)
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	IEA
GO:0006350	transcription	Biological Process	IEA