ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

SF1

Full Name:

splicing factor 1

Alias:

D11S636|ZFM1|ZNF162

Organism:

Homo sapiens (Human)

Chromosome:

11

Genetic Location:

11q13

Physical Location:

64288653-64302816 on NC_000011.8, complement

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Original ID1:

SF1

Dataset Information

Name:		Literature Search
Method:		Literature search
Summary:		We search all human protein coding gene names and the keywords Alcohol or Ethanol or Alcoholism in the title or abstract of all PUBMED publications. For those gene name less than 3 characters or search result hits more than 100, we use the full name to search again and manually check the results to reduce false positive.

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_004630.2	NP_004621.2	NC_000011.8 range: 64288653..64302816, complement
NM_201995.1	NP_973724.1	NC_000011.8 range: 64288653..64302816, complement
NM_201997.1	NP_973726.1	NC_000011.8 range: 64288653..64302816, complement
NM_201998.1	NP_973727.1	NC_000011.8 range: 64288653..64302816, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005840	ribosome	Cellular Component	NAS (8752089)
GO:0005681	spliceosome	Cellular Component	IDA (9731529)
GO:0005634	nucleus	Cellular Component	NAS (7912130)
GO:0046872	metal ion binding	Molecular Function	IEA
GO:0008270	zinc ion binding	Molecular Function	IEA
GO:0046872	metal ion binding	Molecular Function	NAS (7912130)
GO:0003723	RNA binding	Molecular Function	TAS (8752089)
GO:0003714	transcription corepressor activity	Molecular Function	TAS (9660765)
GO:0003702	RNA polymerase II transcription factor activity	Molecular Function	TAS (9660765)
GO:0006350	transcription	Biological Process	IEA
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	IEA
GO:0008150	biological_process	Biological Process	ND (7912130)
GO:0008380	RNA splicing	Biological Process	IEA
GO:0000389	nuclear mRNA 3'-splice site recognition	Biological Process	TAS (15647371)
GO:0000245	spliceosome assembly	Biological Process	NAS (8752089)

Other Database Cross Links

NCBI Entrez Gene:

HGNC:

Ensembl:

ENSG00000168066

MIM:

HPRD:

HuGE Navigator:

dbSNP:

GeneCard:

AceView: