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Gene Information
Gene ID:79810
Symbol:PTCD2
Full Name:pentatricopeptide repeat domain 2
Alias:FLJ12598
Organism:Homo sapiens (Human)
Chromosome:5
Genetic Location:5q13.2
Physical Location:71651955-71690935 on NC_000005.8
Gene Type:protein-coding
Orthologs:This gene has no orthologs in other dataset(s).
Gene in Ethanol Study Datasets
Linkage Dataset
MarkerLODP valueLocation (bp)
D5S647  66282906
Region:66282906-76193808
Phenotype:Alcoholism phenotype along with age, gender, and P300 or constraint
Name:15211641
Method:Linkage
Publication:Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed
Summary:A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb).
Gene Refseq Sequence Annotation
mRNAProteinReference assembly Genomic
NM_024754.3NP_079030.3NC_000005.8 range: 71651955..71690935
Other Database Cross Links
NCBI Entrez Gene:79810
HGNC:25734
Ensembl:ENSG00000049883
MIM:
HPRD:15193
HuGE Navigator:79810
dbSNP:PTCD2
GeneCard:PTCD2
AceView:PTCD2