ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

SPSB2

Full Name:

splA/ryanodine receptor domain and SOCS box containing 2

Alias:

GRCC9|MGC2519|SSB-2|SSB2

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

12p13.31

Physical Location:

6850359-6852712 on NC_000012.10, complement

Gene Type:

protein-coding

Orthologs:

This gene has no orthologs in other dataset(s).

Gene in Ethanol Study Datasets

Linkage Dataset

Marker

LOD

P value

Location (bp)

D12S99

5434815

Region:		3434815-7434815
Phenotype:		Alcoholism phenotype along with age, gender, and P300 or constraint
Name:		15211641
Method:		Linkage
Publication:		Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed
Summary:		A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb).

Gene Refseq Sequence Annotation

mRNA	Protein	Reference assembly Genomic
NM_032641.1	NP_116030.1	NC_000012.10 range: 6850359..6852712, complement

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005575	cellular_component	Cellular Component	ND
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0003674	molecular_function	Molecular Function	ND
GO:0006512	ubiquitin cycle	Biological Process	IEA
GO:0007242	intracellular signaling cascade	Biological Process	IEA
GO:0008150	biological_process	Biological Process	ND