| Gene Information |
| Gene ID: | | 9746 |
| Symbol: | | CLSTN3 |
| Full Name: | | calsyntenin 3 |
| Alias: | | CSTN3|KIAA0726|MGC131797|MGC138488|alcbeta |
| Organism: | | Homo sapiens (Human) |
| Chromosome: | | 12 |
| Genetic Location: | | 12p13.31 |
| Physical Location: | | 7174233-7202807 on NC_000012.10 |
| Gene Type: | | protein-coding |
| Orthologs: | | This gene has no orthologs in other dataset(s). |
|
| Gene in Ethanol Study Datasets |
| Linkage Dataset | | Marker | LOD | P value | Location (bp) | |
| D12S99 | | | 5434815 | | Region: | | 3434815-7434815 | | Phenotype: | | Alcoholism phenotype along with age, gender, and P300 or constraint | | Name: | | 15211641 | | Method: | | Linkage | | Publication: | | Hill et al. Am J Med Genet B Neuropsychiatr Genet. (2004) A genome wide search for alcoholism susceptibility genes. PubMed | | Summary: | | A total of 360 markers for 22 autosomes were spaced at an average distance of 9.4cMand genotyping performed for 330 members of these multiplex families. Extensive clinical data, personality variation, and event-related potential characteristics were available for reducing heterogeneity and detecting robust linkage signals. Multipoint linkage analysis using different analytic strategies give strong support for loci on chromosomes 1, 2, 6, 7, 10, 12, 14, 16, and 17. Thirty five markers with LOD score >2.0 at baseline using the binary alcoholism phenotype along with age, gender, and P300 or constraint (Table III). Here we listed the genes between two near markers or genes near a separate marker (within 2Mb). |
|
|
|
| Gene Refseq Sequence Annotation |
|
| Gene Ontology (GO) Annotation |
| GO ID | GO Term | Category | Evidence (PubMed) | |
| GO:0000139 | Golgi membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005789 | endoplasmic reticulum membrane | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016021 | integral to membrane | Cellular Component | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005509 | calcium ion binding | Molecular Function | IEA | |
| GO:0007155 | cell adhesion | Biological Process | IEA | |
| GO:0007156 | homophilic cell adhesion | Biological Process | IEA | |
|
| Other Database Cross Links |
| NCBI Entrez Gene: | | 9746 |
| HGNC: | | 18371 |
| Ensembl: | | ENSG00000139182 |
| MIM: | | 611324 |
| HPRD: | | 16725 |
| HuGE Navigator: | | 9746 |
| dbSNP: | | CLSTN3 |
| GeneCard: | | CLSTN3 |
| AceView: | | CLSTN3 |
