Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004582 Human Papillomavirus HPV16 NC_001526.2
 5957 5987 hg19 2 22439141 22439163 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004583 Human Papillomavirus HPV16 NC_001526.2
 6801 6827 hg19 2 22416193 22416220 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004586 Human Papillomavirus HPV16 NC_001526.2
 7259 7359 hg19 2 22416230 22416260 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004587 Human Papillomavirus HPV16 NC_001526.2
 7876 7901 hg19 2 27137149 27137175 p23.3 PRR30 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004630 Human Papillomavirus HPV16 NC_001526.2
 6589 6627 hg19 2 151136031 151136062 q23.3 ENSG00000236885 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004639 Human Papillomavirus HPV16 NC_001526.2
 1573 1599 hg19 20 47031754 47031780 q13.12 EYA2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004640 Human Papillomavirus HPV16 NC_001526.2
 1685 1703 hg19 20 47032273 47032299 q13.12 EYA2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS10019932 Hepatitis B virus - NC_003977.1
 - - hg19 2 215383326 215383778 q35 FN1 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS10019933 Hepatitis B virus - NC_003977.1
 - - hg19 2 215384022 215384184 q35 FN1 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS10019934 Hepatitis B virus - NC_003977.1
 - - hg19 2 215386712 215386955 q35 FN1 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0