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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20003281 Human Papillomavirus - NC_001526.2
AY262282.1
 - - hg19 chr21 23684977 23684977 q21.2 - Tumor Not given High-throughput Viral Integration Detection method 25581428 2015 VISDB1.0
TVIS20003634 Human Papillomavirus HPV16 NC_001526.2
 - - hg19 chr21 20582475 20582475 q21.1 - Cell line Not given High-throughput Viral Integration Detection method 25581428 2015 VISDB1.0
TVIS20004254 Human Papillomavirus HPV16 AY686584
 680 - hg19 chr21 41694041 41694041 q22.3 LINC00111 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004255 Human Papillomavirus HPV16 AY686584
 3020 - hg19 chr21 41694081 41694081 q22.3 LINC00111 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004256 Human Papillomavirus HPV16 AY686584
 1308 - hg19 chr21 41664638 41664638 q22.3 - Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004257 Human Papillomavirus HPV16 AY686584
 2219 - hg19 chr21 41647724 41647724 q22.3 ENSG00000296085 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004258 Human Papillomavirus HPV16 AY686584
 3404 - hg19 chr21 41667372 41667372 q22.3 - Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004259 Human Papillomavirus HPV16 AY686584
 3423 - hg19 chr21 41677908 41677908 q22.3 - Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004260 Human Papillomavirus HPV16 AY686584
 4419 - hg19 chr21 41639174 41639174 q22.3 - Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004261 Human Papillomavirus HPV16 AY686584
 5101 - hg19 chr21 41694706 41694706 q22.3 LINC00111 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0