Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004442 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr4 118962196 118962196 q26 ENSG00000309732, SYNPO2 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS10014880 Hepatitis B virus - NC_003977.1
 467 711 GRCh37.p10 chr4 54042613 54049074 q12 CHIC2, ENSG00000282278 Cell line Hepatocellular carcinoma PCR and Sanger sequencing 24582836 2014 VISDB1.0
TVIS10014887 Hepatitis B virus - NC_003977.1
 1671 1811 GRCh37.p10 chr4 99028288 99028424 q23 METAP1 Cell line Hepatocellular carcinoma PCR and Sanger sequencing 24582836 2014 VISDB1.0
TVIS10014890 Hepatitis B virus - NC_003977.1
 1805 1658 GRCh37.p10 chr4 52197624 52197801 q12 - Cell line Hepatocellular carcinoma PCR and Sanger sequencing 24582836 2014 VISDB1.0
TVIS20005122 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 chr4 93867671 93868027 q22.2 - Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS10019937 Hepatitis B virus - NC_003977.1
 - - hg19 chr4 44208441 44208692 p13 KCTD8 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS10019954 Hepatitis B virus - NC_003977.1
 - - hg19 chr4 62785452 62785686 q13.1 ENSG00000297853 Tumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS30003619 Human Immunodeficiency Virus - Not given - - hg19 chr4 771703 771703 p16.3 PCGF3-AS1 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003620 Human Immunodeficiency Virus - Not given - - hg19 chr4 1185452 1185452 p16.3 ENSG00000306967, SPON2 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003621 Human Immunodeficiency Virus - Not given - - hg19 chr4 1299032 1299032 p16.3 MAEA Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0